KEGG   Vibrio mediterranei: BSZ05_04210
Entry
BSZ05_04210       CDS       T04936                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
vsh  Vibrio mediterranei
Pathway
vsh02024  Quorum sensing
vsh03060  Protein export
vsh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vsh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    BSZ05_04210
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BSZ05_04210
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BSZ05_04210
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vsh02044]
    BSZ05_04210
Enzymes [BR:vsh01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     BSZ05_04210
Secretion system [BR:vsh02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   BSZ05_04210
  Eukaryotic Sec-SRP protein
   BSZ05_04210
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 CbiA cobW KTI12 AAA_24 AAA_26 AAA_31 AAA_30 T2SSE AAA_33 Mg_chelatase AAA_18 APS_kinase ATP_bind_1 AAA_19 AAA_14 AAA_16 Helicase_RecD YqeC Rad17 DUF892 Fe-ADH_2 Thymidylate_kin
Other DBs
NCBI-ProteinID: ASI89091
UniProt: A0AAN1FED8
LinkDB
Position
1:complement(934978..936411)
AA seq 477 aa
MAKVYSLQLIAIYSEEKEMFENLTDRLSKTLKNISGKGRLTDDNIKDTLREVRMALLEAD
VALPVVRDFIKGVKERAVGVEVSKSLTPGQEFIKIVQAELESVMGESNEALDLAAQPPAV
ILMAGLQGAGKTTSVGKLSKLLHERDKKKVLVVSADVYRPAAIKQLETLATDIGVDFFPS
SADQKPIDIANAAIDHAKKKFYDVLIVDTAGRLAVDHEMMDEIKDLHSAINPVETLFVVD
AMTGQDAANTAKAFGDALPLTGVILTKVDGDARGGAALSVRHITGKPVKFLGVGEKTDAL
EPFHPDRVASRILGMGDVLSLIEDLQRNVDTDKAEKMAKKFKEKKGFDLEDFREQLGQMQ
NMGGMMGMMDKLPGMSNLPDNVKDKVDDKMFKQMEAIINSMTMKERQRPELIKGSRKKRI
AAGSGTQVQDVNRLLKQFTQMQKMMKKMQKGGMRGMMRNMQGMMGGMGGGGFNPFGR
NT seq 1434 nt   +upstreamnt  +downstreamnt
ctggctaaggtatactcactacaattgatcgcaatttacagcgaagagaaagaaatgttt
gagaatttaacggatcgtctatccaaaacgctgaagaatatcagcggcaaaggtcgtctg
accgacgacaatattaaagatactctgcgcgaagttcgcatggcgcttctagaagccgac
gttgctctgccagtagttcgagatttcatcaaaggcgtaaaagagcgtgccgttggtgtt
gaagtttctaaatccttaactccaggccaagagttcatcaaaatcgttcaagctgagctt
gagtcggtcatgggtgaatccaacgaagcactggacctagctgcacagccgccggcggtc
atcttaatggcaggtctgcaaggtgcgggtaaaacgaccagtgttggtaaactctctaaa
ctgctgcatgagcgtgacaagaagaaagttcttgtggtgtctgccgacgtttatcgtcca
gctgcgatcaaacagctagaaacacttgctaccgatattggcgttgatttcttcccttca
tcagcagatcaaaagccaattgatatagccaatgcagctatcgatcatgcgaagaaaaag
ttttatgacgtattgattgtcgataccgcgggtcgtttagcggttgaccatgagatgatg
gatgagattaaagatctccattcagcaatcaacccagtcgaaacgctgtttgttgtcgat
gcgatgacaggtcaggatgccgcgaacacagcaaaagcttttggtgatgcgctgccgtta
acgggtgttatcttaactaaagtcgacggtgatgctcgtggtggtgcggcgctttctgtt
cgtcatattacgggtaaaccagttaagttcttgggtgtgggtgaaaagactgacgcacta
gaacctttccacccagatcgtgttgcatcacgtatcttaggcatgggtgacgttctttct
cttatcgaagatttacaacgtaatgttgataccgataaagcagaaaagatggcgaagaag
ttcaaggagaagaaaggtttcgacctagaagacttccgtgagcaacttggtcagatgcaa
aatatgggcggtatgatgggaatgatggacaagctaccaggcatgtctaacttacctgat
aacgttaaagacaaagttgacgacaagatgtttaagcagatggaagcgatcatcaactca
atgacaatgaaagagcgtcaacgtcctgaattaattaaaggttctcgtaaaaagcgtatc
gctgcaggttctggtactcaagtgcaagatgttaaccgtctcttgaagcaattcactcag
atgcaaaaaatgatgaagaagatgcagaaaggcggcatgcgcggaatgatgcgcaacatg
caaggcatgatgggtggcatgggcggcggcggcttcaatccatttggtcgctag

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