Vibrio mediterranei: BSZ05_05380
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Entry
BSZ05_05380 CDS
T04936
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSZ05_05380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vsh03021
]
BSZ05_05380
03400 DNA repair and recombination proteins [BR:
vsh03400
]
BSZ05_05380
Enzymes [BR:
vsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSZ05_05380
Transcription machinery [BR:
vsh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSZ05_05380
DNA repair and recombination proteins [BR:
vsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSZ05_05380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
AmiR_N
Motif
Other DBs
NCBI-ProteinID:
ASI89282
UniProt:
A0A2C9P984
LinkDB
All DBs
Position
1:1178421..1178693
Genome browser
AA seq
90 aa
AA seq
DB search
MARVTVQDAVEKVGNRFDLVLISARRARQMQIGGKDALVPEENDKPTVIALREIEEGLIT
KEVLDARERQEQQEQEAAELAAVSSIAHNR
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaagacgctgttgaaaaagttggtaaccgtttcgacctagtt
cttatttcggctcgccgcgcacgtcagatgcaaatcggtggtaaagatgcattagtgcca
gaagaaaatgataagccaacggttatcgcacttcgcgaaatcgaagaaggcttgatcacg
aaagaagtactagatgcacgtgaacgtcaagagcagcaagagcaagaagctgcagaacta
gcggcagtaagcagcattgctcacaaccgttaa
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