Vibrio mediterranei: BSZ05_05660
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Entry
BSZ05_05660 CDS
T04936
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
vsh
Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vsh03021
]
BSZ05_05660
Transcription machinery [BR:
vsh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BSZ05_05660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
ASI89331
UniProt:
A0AAN1FEU9
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All DBs
Position
1:complement(1241436..1242290)
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AA seq
284 aa
AA seq
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MANQAYPMALVTQDSLDGYIRSVNSYPMLTADEERELAERLHYDGEIEAAKGLILSHLRF
VVHVARGYSGYGLPMADLVQEGNIGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKSKKRLGWFNNGEVETVAKELGVEPSEVREMESRLAAQDS
TFEMQNDDDDTGSYTAPALYLEDKSSDLAEDFEAKNWETHTNNRLGHALATLDERSQHIV
RSRWLDDNKSTLQDLADTYGVSAERIRQLEKNAMKKLKAAVGEF
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccaagcgtatccaatggcattagtgacacaagatagcctcgatggctacatc
cgctcagtcaacagctacccaatgctgacggctgatgaggagcgtgaactagcagagcga
ttacactatgatggtgaaatagaggcagcgaaagggctgattttgtctcatctgcgattt
gttgttcatgttgctcgtggctattctggctatgggcttcctatggctgacttagttcaa
gaaggcaatattggtctgatgaaagctgtgaagcgcttcaaccctgaagtaggggtaaga
ctggtatctttcgcggtgcattggattaaagcggaaatccatgaatacgtattacgtaac
tggcgtatcgtgaagattgcgacgactaaagctcagcgcaaactgttttttaacctacgt
aagtcgaaaaaacgcttaggttggttcaacaatggtgaagtagaaacggtagcaaaagag
ctgggagtcgagccatcagaagttagagagatggaatcacgtctcgcggctcaagattca
acgtttgaaatgcaaaacgacgatgacgataccggttcatacactgcacctgcgctttat
cttgaagataagagctcagatctcgcagaagactttgaagctaagaactgggaaactcac
accaataaccgtttaggccacgcgcttgcgacgcttgatgagcgtagccaacatatcgtg
cgctctcgttggttggatgacaacaaatctacgttgcaagatttagccgatacctacggt
gtatctgcggagcgtattcgccagttagagaagaacgcaatgaagaaacttaaggcagcc
gtcggcgagttttaa
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