Vibrio mediterranei: BSZ05_05775
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Entry
BSZ05_05775 CDS
T04936
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh00300
Lysine biosynthesis
vsh00470
D-Amino acid metabolism
vsh01100
Metabolic pathways
vsh01110
Biosynthesis of secondary metabolites
vsh01120
Microbial metabolism in diverse environments
vsh01230
Biosynthesis of amino acids
Module
vsh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BSZ05_05775
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BSZ05_05775
Enzymes [BR:
vsh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BSZ05_05775
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ASI89354
UniProt:
A0AAN1KMF2
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All DBs
Position
1:complement(1260672..1261925)
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AA seq
417 aa
AA seq
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MDYFNYQDDGQLWAEETSLTQLAEQYGTPLYVYSRATLERHWNAFDKSVGDHPHLVCYAV
KANSNIGVLNTLARLGSGFDIVSGGELERVVAAGGEPSKVVFSGVGKTAQEMRRALELGI
KCFNVESEPELERLNQVAGEMGVVAPISLRINPDVDANTHPYISTGLRDNKFGIAFDRAP
AVYKFAQSLPNLAVHGIDCHIGSQLTDIEPFIDATDRLLALIDQLRADGVDIKHLDVGGG
LGVVYRDELPPQPSDYAKALLARLENHPELELIFEPGRAIAANAGVLLTKVEFLKHTEHK
NFAIVDAAMNDLMRPALYQAWQDIIPVSPREGEAITYDLVGPICETGDFIGKDRSLVLEQ
NDLLAVRSAGAYGFVMSSNYNTRPRVAEIIVDGDKAHVVRQRESLQSLWELESILPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattatttcaactatcaggacgatggccagctttgggccgaggaaacgtcacttacg
caacttgccgagcaatacggcactccgctatacgtctattcacgagcgacgctagaacgt
cactggaatgcgtttgataaatcggtgggtgaccacccacatctcgtgtgctacgcggtg
aaagcgaactccaatataggtgtgttaaatacgctagcacgtcttggttctggctttgat
atcgtttctggcggtgagctagaacgtgtcgtggcggcaggtggtgagccaagcaaagta
gtattctctggtgtgggcaaaactgcacaagagatgcgtcgcgcactagagctaggcatt
aagtgttttaacgttgaatctgaacctgaattagaacgacttaatcaagtcgccggtgaa
atgggtgtagttgcgccgatttcattgcgaattaacccggatgtagatgccaacacacac
ccttatatctcgacgggtctgcgtgacaataagtttggcattgcattcgatcgcgctcca
gcggtgtacaagtttgctcaaagcctgccaaaccttgcagttcatggtatcgattgtcat
atcggttcacagcttacagatattgaaccgtttattgatgcgacagatcgtctgcttgct
ctcattgaccagttgcgtgctgatggggttgatattaagcaccttgatgttggtggtggt
ctaggcgtggtttatcgtgatgaattaccgccacagccttcagattatgcgaaagcacta
ttagctcgattagagaaccacccagagcttgagcttatcttcgaaccaggtcgtgctatt
gcggcgaatgctggtgtgctgttgaccaaagttgagttcctaaaacataccgaacataag
aactttgcgattgttgatgcggcgatgaatgacttgatgcgacctgcattgtatcaagcg
tggcaagacattattccggtttcaccacgagagggtgaagcgataacgtacgacctcgtt
ggccctatttgcgaaacgggtgactttatcggtaaagaccgttctttggtcttagagcaa
aacgacttactcgccgttcgctcagcaggtgcttatggattcgttatgtcttcgaactac
aacacgcgtccacgtgttgcagaaatcattgtcgatggagataaggcgcatgtcgtgcgt
cagcgcgaatctctgcaaagtctttgggaattagaaagcatcttaccggagtaa
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