Vibrio mediterranei: BSZ05_05990
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Entry
BSZ05_05990 CDS
T04936
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh00730
Thiamine metabolism
vsh01100
Metabolic pathways
vsh01240
Biosynthesis of cofactors
Module
vsh_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BSZ05_05990
Enzymes [BR:
vsh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
BSZ05_05990
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ASI89390
UniProt:
A0AAJ3ENX5
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All DBs
Position
1:complement(1305374..1307296)
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AA seq
640 aa
AA seq
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MSTRKQSRLEAKNFIDTLSVTPYPNSQKTYIQGSRSDLQVPMREISLADSLIGGSQDNPI
YVPNEPIHVYDTSGVYTDPNHHIDLYSGLPKLREQWIDERSDTEVLAGVSSEFAKERLED
ETLDELRYGQLPRIRRGVEGACVTQLHYARKGIITPEMEYIAIRENMGRQKLNDEMLTQQ
HPGQHFGANLPKEITPEFVRKEVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSS
VTSSIEEEVEKLVWGTRWGADTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAENLTWEVMRDTLIEQAEQGVDYFTIHAGLLLSHIPMTAKRVTGIVSRGGSIIAKWCL
AHHEESFLYTNFKEICEICARYDVALSLGDGLRPGSIADANDEAQFAELRTLGKLTKIAW
EHDVQVIIEGPGHVPMHMIKENMEEQLEHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM
IGWYGCAMLCYVTPKEHLGLPNKDDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKAR
FEFRWEDQFNLSLDPDTARQFHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAKEQ
QGAESIDIKLIDDPLEGMRQKSKEFRATGAELYHPAVTEE
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacacgtaagcaaagtagactggaagcaaaaaacttcatcgatacgctatcggtg
actccctatccaaactctcagaagacctatattcaaggtagccgcagtgacttacaagtc
cctatgcgcgagatatcgttggccgatagcctaattggaggcagtcaagataaccctatc
tatgttcccaacgaacctattcatgtctatgacacgtccggtgtttataccgatccaaac
caccatattgacctctattcaggcctaccaaagttaagagaacaatggattgatgaacgt
tctgatacggaagtattagctggtgtgagctctgaatttgccaaagagagacttgaggat
gagacgcttgacgagcttcgctatggtcagcttccccgtattcgaagaggtgtagagggc
gcatgtgttactcagctccattatgctaggaaaggcatcattacccctgaaatggaatat
atcgcgatacgcgagaatatgggacgtcaaaaactcaatgatgaaatgctcacccagcag
catccgggtcagcactttggtgctaatctacctaaagagattacgccagaattcgttcga
aaagaggtagctgaagggcgcgcgatcattccttccaatattaaccaccccgagtcagaa
ccaatgatcattggacgcaatttcttggtgaaggttaatgccaatattggcaattcatca
gtaacttcatcgattgaagaagaagtagaaaaacttgtttggggcactcgttggggcgcc
gatacggtaatggatttgtcgacgggccgtaatatccacgaaaccagagagtggatattg
agaaatagccctgtgccaattggtacggttcctatgtatcaagccttagagaaggtgaat
ggagttgctgaaaatcttacttgggaagttatgcgcgatacgcttatcgagcaagcagag
cagggcgttgactactttactatacatgctggcttacttctgagtcatattccgatgact
gctaaacgtgttactggaatcgtatctcgcggcggatccattattgctaagtggtgtctt
gcccaccacgaggagagtttcctctataccaacttcaaagaaatctgtgagatatgtgca
cgctatgacgtggctctttccttaggagatggcttacgccctggctctattgctgatgcc
aatgatgaagctcagtttgccgaattacgcacacttgggaaactcactaaaattgcttgg
gaacacgatgtacaagtaattattgaaggtccaggccatgttccaatgcatatgatcaaa
gagaatatggaagagcaactggagcattgtcacgaagcaccattctacacgttaggtcca
ctcacaacagatattgcaccaggatatgaccacattacgtcaggcattggtgcggctatg
attggctggtacgggtgcgctatgctgtgctacgtcactccaaaagaacacctcggtcta
ccaaacaaagacgatgtaaaaactgggcttatcacctataagctcgccgctcacgctgcc
gacttagctaaagggcatcctggtgcacaaattcgagacaacgctttgtcaaaggctcgt
tttgagttccgttgggaagaccagtttaacttgtcattagaccctgacaccgcgcgtcaa
tttcacgatgagaccctccctcaggagtccggaaaagtcgctcacttttgttctatgtgc
ggacctaaattttgctcaatgaaaatatctcaagaagttcgagaatacgccaaagagcag
caaggggctgagagcatcgacatcaaattgattgatgatccattggagggtatgcgtcaa
aaatctaaagagttcagagctacgggcgccgaactttatcatccagccgtaactgaagag
taa
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