Vibrio mediterranei: BSZ05_06355
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Entry
BSZ05_06355 CDS
T04936
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
vsh
Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsh03032
]
BSZ05_06355
03400 DNA repair and recombination proteins [BR:
vsh03400
]
BSZ05_06355
Enzymes [BR:
vsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BSZ05_06355
DNA replication proteins [BR:
vsh03032
]
Prokaryotic type
DNA Topoisomerases
BSZ05_06355
DNA repair and recombination proteins [BR:
vsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BSZ05_06355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
UFD1
Motif
Other DBs
NCBI-ProteinID:
ASI89453
LinkDB
All DBs
Position
1:1375393..1377810
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AA seq
805 aa
AA seq
DB search
MSENYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCNDII
VTIHEDNSVSVSDDGRGIPTEMHPEEQVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSKKVTLTIHRGGQIHTQTYHHGEPEAPLTVIGDTDKTGTEIRFWPSEETFTNIE
FHYDILAKRLRELSFLNSGVSIKLIDKREEDKMDHFMFEGGIQAFVEHLNTNKTPIIQKI
FHFDNERDDGITVEVAMQWNDGYQENIYCFTNNIPQRDGGTHLAGFRAALTRTLNTFMDK
EGFSKKAKTATSGDDAREGLTAIVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMGEKLSE
FLVENPGEAKIVCTKIIDAARARDAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSE
LYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLYKVKK
GKQEQYIKDEDAMNQYQVSLALDNAALHVNSEAPALAGEALEKLVQQYNAAVKTVDRMSR
RYPHAMVGEFMYVPRLTAEQCHDAAAVEAWSKQLVEQLNNKEVGASQYSFEVEQHAELGV
NLPKVVVRTHGVTHEHVISVDLLNSKEYRQLADTSEALDGLIEEGAYIKRGERTQEVTNF
VDALEWLIKESRRGLSLQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADQLFTT
LMGDQVEPRRNFIEENALKVANLDV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaattacgattcatcgagtattaaggtactaaagggtctggatgcggtacgt
aagcgtccgggaatgtacattggtgacacggacgatggaaccggtctgcaccacatggtt
tttgaggtggttgataactcaattgatgaagcgttggctggtcactgtaacgacattatt
gtgacaatccatgaggacaactctgtttctgttagcgatgatggtcgtggtatcccgact
gaaatgcacccagaagagcaggtttctgctgcagaagttatcatgacggtacttcacgcg
ggtggtaagtttgatgacaactcgtacaaagtatcgggtggtctgcacggtgtaggtgtt
tcggtagtaaacgcattgtcgaaaaaagtgacgctaaccattcatcgtggcggtcaaatt
catacgcaaacctatcaccatggtgagccagaagcgccacttacagtcattggtgatacg
gataaaacgggtacggaaatccgtttctggccaagtgaagaaaccttcactaacattgaa
ttccattacgatatcttagcaaaacgtcttcgtgagctatcgttcttaaactctggtgtg
tctatcaagctgattgataagcgtgaagaagacaaaatggatcacttcatgtttgaaggc
ggtatccaagcgtttgttgagcacctaaacaccaataaaacaccaatcatccaaaaaatc
ttccacttcgataacgaacgtgatgatggcattactgtcgaagtggcgatgcagtggaac
gatggttaccaagaaaacatctattgctttaccaacaacatccctcaacgtgatggtggt
actcaccttgctggcttccgtgcggcgttaacgcgtacgctgaacacgtttatggataaa
gaaggcttttctaagaaagcgaaaaccgcgacatcaggtgatgatgcgcgtgaaggtcta
accgctatcgtttcggtgaaagtgcctgatcctaagttctcaagccaaaccaaagacaag
ttggtttcatcggaagtgaaatcagcggttgagtctgcgatgggtgagaaactgtctgag
ttccttgttgagaacccaggtgaagcgaagattgtttgtaccaagatcatcgacgccgct
cgtgctcgtgacgcagcacgtaaagctcgtgagatgacgcgtcgtaaaggtgcactagat
ttagccggtctaccaggcaaactggcagactgccaagagaaagacccagcgctttctgaa
ctatacatagtggagggtgactctgcgggcggtagtgctaagcagggtcgtaaccgtaag
aaccaagcgattcttccacttaaaggtaaaatccttaacgtagaaaaagcgcgcttcgat
aagatgctttcttcacaagaagtggcaacgcttatcacggcacttggctgtggtattggt
cgtgatgaatataacccagacaaactgcgttatcacaacatcattatcatgaccgatgcg
gacgtggatggttctcacattcgtacgctgctattaacgttcttctaccgtcaaatgcca
gagcttattgagcgtggctacgtatatattgctcagccaccactttacaaagtgaagaaa
ggcaagcaagagcagtatattaaagatgaagatgccatgaaccagtatcaagtatctctg
gctctagataacgcggcactgcatgttaattctgaagcacctgcactggctggtgaagca
cttgagaagctagttcagcaatacaatgctgcagttaaaacggttgatcgcatgagtcgt
cgttatccacatgctatggttggcgagttcatgtatgtaccacgtctaacggctgagcaa
tgtcatgacgctgcggcggtggaagcatggtctaaacagcttgttgagcagctaaacaac
aaagaagttggcgcaagccaatacagctttgaagtagaacagcacgctgaactgggtgta
aacctacctaaagttgtggttcgtacccatggcgtgactcatgagcacgttattagtgtt
gatctactcaactcgaaagagtatcgccaattggcagatacgtcagaagcgttagacggt
ctgattgaagaaggtgcttacatcaaacgtggtgagcgtactcaagaagttacaaatttc
gttgatgctcttgagtggttaatcaaagagtcacgtcgtggtttaagcctacaacgctat
aaaggtcttggtgagatgaaccctgatcagctgtgggaaacaaccatggatccagagact
cgtcgtatgatgcaggtgacgattgaagacgcggttggcgctgatcaactgtttaccacg
ttgatgggtgaccaagtagaacctcgtcgtaacttcatcgaagaaaacgcactgaaagtg
gccaacctagacgtatag
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