KEGG   Vibrio mediterranei: BSZ05_06525
Entry
BSZ05_06525       CDS       T04936                                 
Name
(GenBank) ATP-dependent DNA helicase Rep
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
vsh  Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:vsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsh03400]
    BSZ05_06525
Enzymes [BR:vsh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BSZ05_06525
DNA repair and recombination proteins [BR:vsh03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BSZ05_06525
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 PhoH
Other DBs
NCBI-ProteinID: ASI89478
UniProt: A0A2C9P9T5
LinkDB
Position
1:1411103..1413121
AA seq 672 aa
MKLNPQQDMAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQSCGYKARNIAAVTFTNKAA
REMKERVGQTLGKNESKGLMVSTFHTMGLNIIRREYKALGLKAGFSLFDDQDQMALLKEL
TEQQLDGDKDLLRSLLGAISNWKNDMLTPEQVKGSARSEQEQLFAHCYEMYQVQMKAYNA
LDFDDLIALPVILLKTNEEVRTRWQKRIQYLLVDEYQDTNTSQYELVKLLVGERARFTVV
GDDDQSIYSWRGAKPQNLILLNKDFPSLKVVMLEQNYRSTSRILRAANILIANNPHVFEK
SLFSEIPDGEKLKVLKAKNEDHEAERVTGELIAHRFVNRTEYRDYAILYRGNHQSRLIEK
VLMQNRVPYKISGGTSFFGRAEIKDIMAYLRVLVNPDDDNAFLRIVNTPRREIGPATLEK
LGSYANMRGKSLFEASFELGLEQHLSGRGLENLRRFTQWVVTIADNAERGNTVEAVRSLV
RDINYEDWLYETSSSAKAAEMRMKNVSDLYSWIVADLEGDNYDKEEKSLKEVVQRLTLRD
MMERGEDEDDSDAVQLMTLHASKGLEFPYVYLIGSEEGILPHQTSIDEDNVEEERRLMYV
GITRAQKELTFTICKERRQYGELIKPEHSRFLDELPFDDVEWEQAKKAVSAEERMQKGQA
HIANIRAMFNKK
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgaagctaaatccgcagcaagatatggcggtgaaatacgtctctggtccatgtctggtt
cttgccggtgctgggtcaggcaaaacccgcgtgataactaataagatagcgtatctagta
caaagctgtggttataaagcgagaaatattgctgccgtaacgtttaccaacaaagctgca
cgtgaaatgaaagagcgtgtaggacaaaccttaggtaaaaatgaatccaaaggtcttatg
gtttccacctttcataccatgggactcaatatcatacgtcgcgagtataaggcgcttgga
ctcaaagctggtttctccctgtttgatgatcaggaccaaatggcgctactcaaagagttg
actgaacagcaactcgatggcgataaagacctgctgcgttccctacttggcgctatttct
aactggaagaacgacatgctgactccagagcaggtgaaaggctcagctcgttcagagcaa
gaacagttatttgcgcactgctatgaaatgtatcaagtacaaatgaaagcgtataacgcg
ctcgactttgatgacttaattgctctgcccgttattctgctaaaaaccaatgaagaagtt
cgcactcgttggcaaaagagaattcagtacctgttggtcgatgagtaccaagataccaac
actagccaatacgaattggttaagttgctggtgggagagcgtgcacgttttactgtcgta
ggtgacgatgatcaatcaatctactcgtggcgcggcgcaaagcctcaaaacctgattctc
ctgaacaaagacttcccaagcctcaaagttgtgatgcttgaacagaactatcgttcaacc
agtcgtatcttacgtgcggccaacatcttgattgctaacaacccgcatgtgtttgagaaa
tcgttattctcagagatccctgacggtgaaaagctcaaagtactaaaagccaaaaatgaa
gatcatgaagcggagcgcgtgacgggtgaattaattgcgcatcgattcgtgaatcgaact
gaatatcgcgattacgctatcttatatagaggcaaccaccaatcacgacttatcgaaaaa
gtcttgatgcaaaaccgtgtgccttacaaaatttccggcggtacttcattttttggtcgt
gctgaaatcaaagacatcatggcgtacctgagagttttggtaaatcctgatgacgataat
gctttcttacgtatcgttaatacgcctcgtcgtgagattggtcctgctacgttggaaaaa
ctaggtagctacgccaatatgcgtggcaaaagcttgttcgaagctagctttgagttgggt
ttggagcaacacttatcagggcgtggcttagagaacttacgacgattcacgcagtgggtt
gtgaccatagctgataacgcagagcgcggtaatacagttgaagctgtgcgttcattagtt
cgcgacatcaactatgaagattggctctatgagacctcttccagtgctaaagccgcagaa
atgcgcatgaagaacgtttctgatctctactcatggattgtcgcagatttagaaggcgat
aattatgataaggaagagaagtcattaaaagaggtcgttcaacggctcacgcttcgagat
atgatggagcgcggagaagatgaggacgacagtgatgctgttcagctaatgacactgcat
gcctcgaaaggtcttgagttcccttatgtttatcttattggttctgaggaaggcattctg
ccacatcaaaccagcatagatgaagataacgtagaagaagaaaggcgactaatgtatgta
ggcattactcgtgcccaaaaagaactcacctttactatatgtaaagagcgaagacagtat
ggtgagctgattaagccagaacatagtcgattcttagatgaattgccgtttgatgatgtc
gaatgggaacaagcaaaaaaagcggtgtctgcagaagaacgaatgcaaaaaggtcaggca
cacattgctaatattcgggcaatgtttaataagaagtaa

DBGET integrated database retrieval system