Vibrio mediterranei: BSZ05_07670
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Entry
BSZ05_07670 CDS
T04936
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSZ05_07670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vsh03019
]
BSZ05_07670
03110 Chaperones and folding catalysts [BR:
vsh03110
]
BSZ05_07670
03029 Mitochondrial biogenesis [BR:
vsh03029
]
BSZ05_07670
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vsh04147
]
BSZ05_07670
Enzymes [BR:
vsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BSZ05_07670
Messenger RNA biogenesis [BR:
vsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BSZ05_07670
Chaperones and folding catalysts [BR:
vsh03110
]
Heat shock proteins
HSP60 / Chaperonin
BSZ05_07670
Mitochondrial biogenesis [BR:
vsh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BSZ05_07670
Exosome [BR:
vsh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BSZ05_07670
Exosomal proteins of other body fluids (saliva and urine)
BSZ05_07670
Exosomal proteins of breast cancer cells
BSZ05_07670
Exosomal proteins of colorectal cancer cells
BSZ05_07670
Exosomal proteins of bladder cancer cells
BSZ05_07670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
Motif
Other DBs
NCBI-ProteinID:
ASI89669
UniProt:
A0AAN1KMQ7
LinkDB
All DBs
Position
1:1652080..1653717
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKDVKFGNDARIKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQSIISEGLKAVAAGMNPMDLKRGI
DKAVAAAVEELKALSVECKDTKAIAQVGTISANSDSTVGNIIAEAMEKVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQEAGSVDLESPFILLIDKKVSNIRELLPTLEAV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKSMLQDIAILTGGTV
ISEEIGLDLEKVTLEDLGQAKRVTITKENSTIIDGAGEETMIQGRVAQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASKVAGLEGDNEEQTVGIRVALRAMEAPIRQITANAGDEESVVANNVKAGEGSYGYNA
ATGEYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDIPQKDAPAMPDMGGMGG
MPGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgttaagtttggcaacgacgcacgaatcaaaatgctagaaggtgta
aacgttctagctgacgcagtaaaagttacgctaggccctaaaggtcgtaacgtagttcta
gacaaatcttttggtgcaccaaccatcactaaagatggtgtatctgtagcgcgtgaaatt
gaactggaagacaagttccagaacatgggcgcacaaatggtgaaagaagttgcttctcaa
gctaacgatgctgcaggtgacggtacaacaactgctactgtactggctcaatcgatcatt
tctgaaggcctaaaagcggttgctgctggcatgaacccaatggatcttaagcgtggtatc
gataaagctgtcgctgctgcggttgaagagctaaaagctctgtctgttgagtgtaaagac
accaaagcgattgctcaggttggtactatctctgcaaactctgactctacggttggtaac
atcattgccgaagcaatggaaaaagtaggtcgtgatggcgttattactgttgaagaaggt
caggctctacaagatgagctagacgtagtagaaggtatgcagttcgatcgtggttaccta
tctccttatttcatcaacaaccaagaagctggtagcgttgatctagagagcccgttcatt
cttcttatcgataagaaagtgtcaaacatccgtgaacttctaccaactcttgaagcagta
gctaaagcatctcgtccgctgcttatcattgcagaagatgtagaaggcgaagcgctagca
acacttgttgtgaacaacatgcgcggtatcgtaaaagtagcggcggttaaagcacctggt
ttcggtgaccgtcgtaagtctatgcttcaagacatcgctatcctaactggcggtacagta
atttctgaagaaatcggtctagaccttgagaaagtgacgctagaagatctaggtcaagct
aagcgtgtaaccatcactaaagaaaactcaaccatcatcgatggcgcgggtgaagaaacg
atgattcaaggtcgtgttgcacaaattcgtcaacaaatcgaagaagcaacgtctgactac
gataaagagaaacttcaagagcgtgtcgctaaacttgctggtggtgtagctgttatcaaa
gttggtgctgcaactgaagttgaaatgaaagagaagaaagaccgagtagaagacgcactt
cacgctactcgtgctgctgttgaagaaggcgtagtggctggtggtggtgttgcacttatc
cgtgcggcatctaaagttgctggtcttgaaggtgacaacgaagagcaaacagtgggtatc
cgcgttgcacttcgcgcaatggaagcaccaattcgtcaaatcactgcaaacgcaggtgac
gaagagtctgtagtagcgaacaacgtgaaagcgggtgaaggtagctacggttacaatgcg
gcaacgggtgagtacggcgatatgctagagatgggtattctagacccaacaaaagtaacg
cgttctgcacttcagtttgctgcatctgttgctggtctaatgatcacaacggaagcaatg
gtaacagatattcctcagaaagatgctccagcaatgcctgatatgggcggtatgggtggc
atgcctggcatgatgtaa
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