KEGG   Vibrio mediterranei: BSZ05_07670
Entry
BSZ05_07670       CDS       T04936                                 
Name
(GenBank) chaperonin GroL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
vsh  Vibrio mediterranei
Pathway
vsh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vsh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BSZ05_07670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vsh03019]
    BSZ05_07670
   03110 Chaperones and folding catalysts [BR:vsh03110]
    BSZ05_07670
   03029 Mitochondrial biogenesis [BR:vsh03029]
    BSZ05_07670
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vsh04147]
    BSZ05_07670
Enzymes [BR:vsh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     BSZ05_07670
Messenger RNA biogenesis [BR:vsh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BSZ05_07670
Chaperones and folding catalysts [BR:vsh03110]
 Heat shock proteins
  HSP60 / Chaperonin
   BSZ05_07670
Mitochondrial biogenesis [BR:vsh03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    BSZ05_07670
Exosome [BR:vsh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   BSZ05_07670
  Exosomal proteins of other body fluids (saliva and urine)
   BSZ05_07670
  Exosomal proteins of breast cancer cells
   BSZ05_07670
  Exosomal proteins of colorectal cancer cells
   BSZ05_07670
  Exosomal proteins of bladder cancer cells
   BSZ05_07670
SSDB
Motif
Pfam: Cpn60_TCP1 REF
Other DBs
NCBI-ProteinID: ASI89669
UniProt: A0AAN1KMQ7
LinkDB
Position
1:1652080..1653717
AA seq 545 aa
MAAKDVKFGNDARIKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQSIISEGLKAVAAGMNPMDLKRGI
DKAVAAAVEELKALSVECKDTKAIAQVGTISANSDSTVGNIIAEAMEKVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQEAGSVDLESPFILLIDKKVSNIRELLPTLEAV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKSMLQDIAILTGGTV
ISEEIGLDLEKVTLEDLGQAKRVTITKENSTIIDGAGEETMIQGRVAQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASKVAGLEGDNEEQTVGIRVALRAMEAPIRQITANAGDEESVVANNVKAGEGSYGYNA
ATGEYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDIPQKDAPAMPDMGGMGG
MPGMM
NT seq 1638 nt   +upstreamnt  +downstreamnt
atggctgctaaagacgttaagtttggcaacgacgcacgaatcaaaatgctagaaggtgta
aacgttctagctgacgcagtaaaagttacgctaggccctaaaggtcgtaacgtagttcta
gacaaatcttttggtgcaccaaccatcactaaagatggtgtatctgtagcgcgtgaaatt
gaactggaagacaagttccagaacatgggcgcacaaatggtgaaagaagttgcttctcaa
gctaacgatgctgcaggtgacggtacaacaactgctactgtactggctcaatcgatcatt
tctgaaggcctaaaagcggttgctgctggcatgaacccaatggatcttaagcgtggtatc
gataaagctgtcgctgctgcggttgaagagctaaaagctctgtctgttgagtgtaaagac
accaaagcgattgctcaggttggtactatctctgcaaactctgactctacggttggtaac
atcattgccgaagcaatggaaaaagtaggtcgtgatggcgttattactgttgaagaaggt
caggctctacaagatgagctagacgtagtagaaggtatgcagttcgatcgtggttaccta
tctccttatttcatcaacaaccaagaagctggtagcgttgatctagagagcccgttcatt
cttcttatcgataagaaagtgtcaaacatccgtgaacttctaccaactcttgaagcagta
gctaaagcatctcgtccgctgcttatcattgcagaagatgtagaaggcgaagcgctagca
acacttgttgtgaacaacatgcgcggtatcgtaaaagtagcggcggttaaagcacctggt
ttcggtgaccgtcgtaagtctatgcttcaagacatcgctatcctaactggcggtacagta
atttctgaagaaatcggtctagaccttgagaaagtgacgctagaagatctaggtcaagct
aagcgtgtaaccatcactaaagaaaactcaaccatcatcgatggcgcgggtgaagaaacg
atgattcaaggtcgtgttgcacaaattcgtcaacaaatcgaagaagcaacgtctgactac
gataaagagaaacttcaagagcgtgtcgctaaacttgctggtggtgtagctgttatcaaa
gttggtgctgcaactgaagttgaaatgaaagagaagaaagaccgagtagaagacgcactt
cacgctactcgtgctgctgttgaagaaggcgtagtggctggtggtggtgttgcacttatc
cgtgcggcatctaaagttgctggtcttgaaggtgacaacgaagagcaaacagtgggtatc
cgcgttgcacttcgcgcaatggaagcaccaattcgtcaaatcactgcaaacgcaggtgac
gaagagtctgtagtagcgaacaacgtgaaagcgggtgaaggtagctacggttacaatgcg
gcaacgggtgagtacggcgatatgctagagatgggtattctagacccaacaaaagtaacg
cgttctgcacttcagtttgctgcatctgttgctggtctaatgatcacaacggaagcaatg
gtaacagatattcctcagaaagatgctccagcaatgcctgatatgggcggtatgggtggc
atgcctggcatgatgtaa

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