Vibrio mediterranei: BSZ05_09765
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Entry
BSZ05_09765 CDS
T04936
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vsh
Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsh03400
]
BSZ05_09765
DNA repair and recombination proteins [BR:
vsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BSZ05_09765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
Lon_C
DnaB_C
DUF7125
GvpD_P-loop
AAA_22
Rad51
SLFN-g3_helicase
nSTAND_NTPase5
RecA_N
AAA
AAA_24
AAA_14
ABC_tran
nSTAND3
AAA_16
NTPase_1
Usp
zinc_ribbon_6
AAA_29
Zn_ribbon_8
Zeta_toxin
Zn_ribbon_Thio2
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ASI90046
UniProt:
A0AAJ3QRK1
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All DBs
Position
1:2074575..2075954
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AA seq
459 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCNACGSWNTISEVRLAASPQVARNERLTGYAGSSTES
SVQTLSEIDLQEVPRFTSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQAMCWLSS
QMPTLYVTGEESLQQVAMRASRLGLPKEHLKMLSETNVDRICQVAEKEQPKLMVIDSIQV
MHVADVQSSPGSVAQVRESATALTRYAKQNNVAIFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLMEAFK
HGFKKAIVPAANMPKGGIEGMQIHGVKKLSEAISAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcgaaaagagcttatgtatgtaatgactgtggggctgacttccctcgttgg
caggggcaatgtaacgcatgtggtagttggaataccattagtgaggttcgtttagcggca
tcacctcaagtcgcacgtaatgaacgcttgaccggttacgcaggcagttccacggaatct
agcgttcaaaccttatctgagatcgacttacaagaggtccctcgatttaccagtggtttt
aaagaacttgatcgtgtacttggaggtggggttgtccctggagcagctatcctcattggc
ggtaacccaggggcaggtaaatcgacactgcttttacaagcaatgtgctggttatcgtcg
caaatgccaaccctttacgtaacgggtgaagaatccttgcagcaggttgccatgcgagca
tctcgtttaggcttgccaaaagagcacctaaaaatgctgtctgaaaccaacgttgatcgt
atttgccaagtggcagagaaggaacaaccgaagctgatggttatcgactccatccaagtt
atgcatgtggctgatgttcaatcgtcgccaggcagtgtggctcaggtaagagagtcggca
accgcattaactcgatatgctaaacagaataacgttgctatcttcattgttggtcacgtg
actaaagatggcacgttggcaggtcctaaggttcttgagcatattattgactgttcggtg
ttgctcgatggtggaacggacagccgatttagaacgttacgtagccacaaaaaccgtttt
ggtgctgttaatgagctaggcgtattcgccatgacgggacaaggtttgaaggaagtgagt
aacccttcggcgattttcctctctcgtggtgaagaagaaacgtcaggcagctcggttatg
gtggtgtgggaaggtacgcgtccactattggttgagattcaagcactggtagattatagc
cagctagcaaacccacgccgagttgcagttggcttagagcaaaatcgcttgtctttattg
cttgctgttttgcataaacatggcggtctgcaaatggctgatcaagatgtatttgtgaat
gtggttggtggtgtcaaagtcaccgaaaccagtgctgacctggccttggtgatggcgtta
ctttcaagctttagagaccgtccgctacctaaagatgtcgtcgtgtttggtgaagttgga
ctggcgggtgaaattcgtccggttccaagtggtcaagagcgattaatggaagcgtttaag
cacggtttcaagaaagccattgtacctgcggcaaatatgccaaaaggcggtattgaaggt
atgcaaatccacggagttaagaagctatctgaagcgatttctgctttcgatgaactttaa
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