KEGG   Vibrio mediterranei: BSZ05_09765
Entry
BSZ05_09765       CDS       T04936                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
vsh  Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:vsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsh03400]
    BSZ05_09765
DNA repair and recombination proteins [BR:vsh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BSZ05_09765
SSDB
Motif
Pfam: ATPase AAA_25 ChlI Zn_ribbon_LapB Lon_C DnaB_C DUF7125 GvpD_P-loop AAA_22 Rad51 SLFN-g3_helicase nSTAND_NTPase5 RecA_N AAA AAA_24 AAA_14 ABC_tran nSTAND3 AAA_16 NTPase_1 Usp zinc_ribbon_6 AAA_29 Zn_ribbon_8 Zeta_toxin Zn_ribbon_Thio2 AAA_23
Other DBs
NCBI-ProteinID: ASI90046
UniProt: A0AAJ3QRK1
LinkDB
Position
1:2074575..2075954
AA seq 459 aa
MAKAKRAYVCNDCGADFPRWQGQCNACGSWNTISEVRLAASPQVARNERLTGYAGSSTES
SVQTLSEIDLQEVPRFTSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQAMCWLSS
QMPTLYVTGEESLQQVAMRASRLGLPKEHLKMLSETNVDRICQVAEKEQPKLMVIDSIQV
MHVADVQSSPGSVAQVRESATALTRYAKQNNVAIFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLMEAFK
HGFKKAIVPAANMPKGGIEGMQIHGVKKLSEAISAFDEL
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggcaaaagcgaaaagagcttatgtatgtaatgactgtggggctgacttccctcgttgg
caggggcaatgtaacgcatgtggtagttggaataccattagtgaggttcgtttagcggca
tcacctcaagtcgcacgtaatgaacgcttgaccggttacgcaggcagttccacggaatct
agcgttcaaaccttatctgagatcgacttacaagaggtccctcgatttaccagtggtttt
aaagaacttgatcgtgtacttggaggtggggttgtccctggagcagctatcctcattggc
ggtaacccaggggcaggtaaatcgacactgcttttacaagcaatgtgctggttatcgtcg
caaatgccaaccctttacgtaacgggtgaagaatccttgcagcaggttgccatgcgagca
tctcgtttaggcttgccaaaagagcacctaaaaatgctgtctgaaaccaacgttgatcgt
atttgccaagtggcagagaaggaacaaccgaagctgatggttatcgactccatccaagtt
atgcatgtggctgatgttcaatcgtcgccaggcagtgtggctcaggtaagagagtcggca
accgcattaactcgatatgctaaacagaataacgttgctatcttcattgttggtcacgtg
actaaagatggcacgttggcaggtcctaaggttcttgagcatattattgactgttcggtg
ttgctcgatggtggaacggacagccgatttagaacgttacgtagccacaaaaaccgtttt
ggtgctgttaatgagctaggcgtattcgccatgacgggacaaggtttgaaggaagtgagt
aacccttcggcgattttcctctctcgtggtgaagaagaaacgtcaggcagctcggttatg
gtggtgtgggaaggtacgcgtccactattggttgagattcaagcactggtagattatagc
cagctagcaaacccacgccgagttgcagttggcttagagcaaaatcgcttgtctttattg
cttgctgttttgcataaacatggcggtctgcaaatggctgatcaagatgtatttgtgaat
gtggttggtggtgtcaaagtcaccgaaaccagtgctgacctggccttggtgatggcgtta
ctttcaagctttagagaccgtccgctacctaaagatgtcgtcgtgtttggtgaagttgga
ctggcgggtgaaattcgtccggttccaagtggtcaagagcgattaatggaagcgtttaag
cacggtttcaagaaagccattgtacctgcggcaaatatgccaaaaggcggtattgaaggt
atgcaaatccacggagttaagaagctatctgaagcgatttctgctttcgatgaactttaa

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