Vibrio mediterranei: BSZ05_10090
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Entry
BSZ05_10090 CDS
T04936
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh00260
Glycine, serine and threonine metabolism
vsh00460
Cyanoamino acid metabolism
vsh00630
Glyoxylate and dicarboxylate metabolism
vsh00670
One carbon pool by folate
vsh00680
Methane metabolism
vsh01100
Metabolic pathways
vsh01110
Biosynthesis of secondary metabolites
vsh01120
Microbial metabolism in diverse environments
vsh01200
Carbon metabolism
vsh01230
Biosynthesis of amino acids
vsh01240
Biosynthesis of cofactors
vsh04981
Folate transport and metabolism
Module
vsh_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BSZ05_10090 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BSZ05_10090 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BSZ05_10090 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BSZ05_10090 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BSZ05_10090 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BSZ05_10090 (glyA)
Enzymes [BR:
vsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BSZ05_10090 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
FGAR-AT_PurM_N-like
Motif
Other DBs
NCBI-ProteinID:
ASI90106
UniProt:
A0AAJ3QRD3
LinkDB
All DBs
Position
1:2150748..2151998
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AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAEALAIDRACELFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEQLALEHKPKMIIGGFSAYSQI
VDWARMREIADKVDAYLFVDMAHVAGLIAAGVYPTPVPHAHVVTTTTHKTLAGPRGGLIL
SNAGEDMYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKEYQARVVKNAKAMVAQ
FQERGYKIVSNGTENHLFLVDLIDKDITGKEADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGSPAITRRGFTEADATELANWMCDVLDNINDESVIEATKAKVLEICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacatcgctgattacgatgcggagctatttgcagctattcaa
gaagaaacccttcgtcaagaagagcacatcgagcttatcgcttcggaaaactacaccagc
cctcgcgtaatggaagcgcaaggctctcagctaactaacaaatatgctgaaggttatccg
ggcaagcgctactacggtggttgtgaatacgtcgataaagcggaagcactagcgattgac
cgtgcgtgtgagctatttggttgtgagtatgcgaacgttcagcctcactctggctctcaa
gcgaatagtgccgtgtacatggctctacttaacccgggcgatacagttttaggtatgagc
ttggctcacggtggtcaccttactcacggttctccagttaacttctctggtaagcactac
aacgtaattccttacggtatcgatgaagctggtcaaatcaactatgacgagatggaacag
ctagcacttgagcacaagccaaaaatgatcattggtggtttctctgcgtacagccagatc
gtagactgggctcgtatgcgtgaaattgcggataaagtcgacgcgtatctgtttgttgat
atggcgcacgttgcaggtcttattgcagctggtgtttatccaacgcctgttcctcatgca
cacgttgtgacgaccacaacacacaaaacattagcgggtcctcgcggtggtctaatcctg
tctaatgcaggcgaagacatgtacaagaagctaaactcagctgttttccctggtggtcaa
ggtggtcctttgatgcatgttatcgctggtaaagcagtagcattcaaagaagcaatggag
cctgagtttaaagagtaccaagctcgcgtagttaagaacgcaaaagcgatggttgcccag
ttccaagagcgcggttacaagattgtgtctaacggaactgagaaccacctgttcctagtt
gacctaatcgacaaagatattacaggtaaagaagcggatgcagccctaggtgcagcgaac
attactgtaaacaaaaactcagtacctaatgacccacgcagcccgttcgtaacgtctggt
atccgtgttggttctccagcgattactcgccgtggttttactgaagcagatgcgactgag
cttgctaactggatgtgtgatgttttagacaacatcaatgatgaatcagtgattgaagcg
acaaaagctaaagtactagagatctgtaagcgtctacctgtttacgcttaa
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