Vibrio mediterranei: BSZ05_10725
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Entry
BSZ05_10725 CDS
T04936
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh00541
Biosynthesis of various nucleotide sugars
vsh01100
Metabolic pathways
vsh01250
Biosynthesis of nucleotide sugars
Module
vsh_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BSZ05_10725
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsh01005
]
BSZ05_10725
Enzymes [BR:
vsh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
BSZ05_10725
Lipopolysaccharide biosynthesis proteins [BR:
vsh01005
]
Lipid A
BSZ05_10725
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ASI90207
UniProt:
A0AAN1KNA7
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All DBs
Position
1:2265942..2266793
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AA seq
283 aa
AA seq
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MEMKTVHVGDIPVANDKPFTLFAGMNVLESRDLAMQICEHYVKVTEKLGIPYVFKASFDK
ANRSSVHSYRGPGLEEGMKIFQELKDTFGVKIITDVHTEEQAKPVADVVDVIQLPAFLAR
QTDLVEAMAKTNAVINVKKPQFMSPGQVGNIVDKFAECGNDKIILCERGSCHGYDNLVVD
MLGFGVMKKASNGSPIIFDVTHSLQMRDPSGAASGGRREQTVELAKAGLATGIAGLFIEA
HPNPDKALCDGPSALPLDKLEPFLAQMKALDDLIKGFEHIDIK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgaaaacggtacacgtaggtgatatcccggtagcaaatgataagccgttcacg
ctttttgctggaatgaatgtgctggaatcacgtgacttagcgatgcaaatctgtgagcac
tatgtgaaggtgacagaaaagctaggtattccatacgtatttaaagcgtcgtttgataaa
gcgaaccgtagctcagtgcattcttatcgtggtcctggccttgaagaaggcatgaagatt
ttccaagagctaaaagacacctttggtgtgaaaatcattacggatgttcatacagaagag
caagcaaagcctgttgccgacgtggtagatgttattcagctacctgccttcttagctcgt
cagactgaccttgttgaagcgatggcaaaaacaaatgcggttatcaacgttaagaagcct
cagtttatgagcccaggacaagtaggtaacattgttgataagttcgctgagtgtggtaac
gataaaatcattctttgtgaacgtggctcatgtcatggttacgataaccttgtggtcgac
atgcttggctttggcgttatgaaaaaagcttctaacggtagcccaatcattttcgatgtg
acgcactcacttcaaatgcgtgatccatcgggtgcggcatctggtggtcgtcgtgaacaa
acggtcgagcttgcaaaagcgggacttgcgacgggaattgcgggtctatttatcgaagcg
cacccgaatccagataaagcactatgtgatggtccgtcagcactgcctttagataagcta
gaaccattcttagcgcaaatgaaagcgttggatgatcttatcaaaggttttgagcacatc
gacattaaataa
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