Vibrio mediterranei: BSZ05_11640
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Entry
BSZ05_11640 CDS
T04936
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
vsh
Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vsh03009
]
BSZ05_11640
Enzymes [BR:
vsh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
BSZ05_11640
Ribosome biogenesis [BR:
vsh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BSZ05_11640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
DUF3603
TGS
Cupin_2
CRISPR_Cas2
Orexin
Motif
Other DBs
NCBI-ProteinID:
ASI90369
UniProt:
A0AAN1FGS6
LinkDB
All DBs
Position
1:2475237..2476184
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AA seq
315 aa
AA seq
DB search
MSEIRTKVQFVDIDDDMAGQRIDNFLRNQLKNIPKSVVYRIVRKGEVRVNKKRVKAEYKL
QAGDSVRIPPVTIEEKQEEAPISTKLNKVAELESQIIYEDDHMLILNKPSGIAVHGGSGL
KFGAIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYFAL
VMGKWKPSCRVVKAPLLKNEVNSIVRVNPNGKPSETRFKVLESFEQATLIQASPITGRTH
QIRVHTQYTGHPIAWDDRYGDRRFDAYTAKVGLDRLFLHAANIVFKHPANDEKMEIHAEM
EPKLQQAIKKLKAGV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaattagaactaaagtccaatttgtcgatattgacgacgatatggctggtcag
cgcatcgataactttttgcgcaaccaattgaaaaacattcctaagagtgttgtgtaccga
atcgtgcgcaagggtgaggtacgtgtaaacaaaaagcgtgtcaaagcggaatacaagctt
caagcaggggatagcgtacgtatacctcctgttacaatagaagagaagcaagaagaagcg
ccaatcagcacaaaattgaataaagtggcagagcttgagtcacaaattatctatgaagac
gaccacatgctgatcttaaataagccatctggaatagcggttcatggtggtagtggtttg
aagtttggagcgattgaagctctaagagcattacgtccacaagcacgcttcttagaatta
gttcaccgtatagatcgcgatacttcaggtattcttttagttgcgaagaagcgatctgct
ttgcgtcatttgcaagctcagtttcgtgagaaaacggtacagaagtattactttgcccta
gtaatgggcaaatggaagcctagttgtcgagtagtaaaagcaccgctgctaaagaatgaa
gtgaatagtattgttagggttaaccctaatggcaaaccttcagaaactcgcttcaaggta
ctagagtcgtttgagcaggcaacgctgattcaagcaagcccaattactgggcgtacccac
caaattcgagtccatacacagtacacaggccatccgatagcatgggatgatcgctatggt
gatcgccggtttgatgcctatacagcgaaagtgggtctagaccgtttgttcctgcatgcc
gcaaacattgtcttcaagcatccagcgaatgatgaaaaaatggaaatacatgctgagatg
gagccaaagttgcagcaagcgattaaaaagctaaaagcaggcgtataa
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