Vibrio mediterranei: BSZ05_11800
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Entry
BSZ05_11800 CDS
T04936
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
vsh
Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
BSZ05_11800
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TPR_19
Zn_ribbon_LapB
TPR_1
TPR_2
TPR_16
TPR_14
TPR_11
TPR_12
TPR_7
TPR_8
TPR_Slam
ARM_TT21_5th
TPR_20
ANAPC3
TPR_15
TPR_CcmH_CycH
ARM_TT21_C
Zn_ribbon_15
ARM_TT21
SPG48
DUF7129
Motif
Other DBs
NCBI-ProteinID:
ASI90399
UniProt:
A0AAJ3BH35
LinkDB
All DBs
Position
1:2509297..2510466
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AA seq
389 aa
AA seq
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MLELLFLLLPIAAAYGWYMGQRSVKHDRQEQSHQISRQYMTGLNLLLSDQSDKAVDHFIE
LLQVDNETIDTHLALGNLFRSRGEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVS
GFLDRAEKIFVQLVDEPEHREAALTQLLAIYQQTSEWYKAIEYATALQKMGKKRVKNSIA
HFWCELAMIEKADGNTNKAIQNFKKALAVDPRCARASISLGKLYLEDEDYAKTVSYLESV
LEQDKDFISEVLPTLAECYHHLGQEQGLVEFLRASIEKGAGVSAELMLAQLVANHEGTEA
AQALLTRQLVRSPTMKGFYRLMDYHLANAEEGRAKESLTTLQSLVGEQLKTKPHYRCRKC
GFSTHSLYWHCPSCKGWGTIKPIRGLDGE
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagctattattcctgcttcttccgatagctgcagcctatggttggtacatgggt
cagcgcagcgtgaagcatgatcgacaggagcaatcgcatcaaatatctcgtcaatatatg
acgggccttaacctattgctatctgatcaatcggataaagcggttgatcactttatcgaa
ctgctacaagtcgataatgagactattgatactcacctagctttgggtaacttatttcgt
tcacgcggcgaagtagaccgagccattcgaattcaccaaaaccttatctcccgttctggg
ttgaccatcgatcagaaaaacctcgctctgcaacagcttgctaaagactatatggtgtca
ggttttcttgaccgtgcagaaaagatcttcgttcaattggttgatgaacctgaacatcgt
gaagctgctctaacgcaactgctggcaatctatcagcaaaccagtgagtggtataaagcg
attgagtacgccacagcattacaaaagatgggcaagaagcgagtgaagaacagcatcgct
catttttggtgtgagttggctatgatcgaaaaagccgatggtaatactaataaggcgatc
caaaactttaaaaaggcccttgccgttgaccctaggtgtgctcgtgccagcatttcatta
ggtaaactttatctggaagatgaagattacgctaaaaccgtgtcttaccttgagtcagtg
ctagaacaagataaagactttatcagtgaagttctccctaccttggctgagtgttatcac
cacttagggcaagaacagggtttggttgaatttctgagagccagtattgaaaaaggtgcc
ggtgtttctgctgagttgatgttagcgcagctagttgcaaaccacgaaggaacggaggcc
gcacaggcgttgcttactcggcagttggttcgtagcccaaccatgaaaggtttctaccgc
ctgatggactatcatcttgcgaatgcggaagagggccgagcgaaggagagcttaacgact
ttgcaatcactggtgggtgagcaactaaaaactaagccgcactatcgatgccgtaaatgt
ggcttttcaacgcattcgttatattggcattgtccttcatgtaaaggatggggtacgatc
aagcctatacgaggactggatggcgagtag
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