KEGG   Vibrio mediterranei: BSZ05_11955
Entry
BSZ05_11955       CDS       T04936                                 
Name
(GenBank) transcriptional regulator
  KO
K03746  DNA-binding protein H-NS
Organism
vsh  Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:vsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vsh03036]
    BSZ05_11955
   03400 DNA repair and recombination proteins [BR:vsh03400]
    BSZ05_11955
Chromosome and associated proteins [BR:vsh03036]
 Prokaryotic type
  Nucleoid associated proteins
   HNS (histone-like nucleoid structuring protein)
    BSZ05_11955
DNA repair and recombination proteins [BR:vsh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BSZ05_11955
SSDB
Motif
Pfam: Histone_HNS_N Histone_HNS DUF4355 TRCF DUF3037
Other DBs
NCBI-ProteinID: ASI90429
UniProt: A0AAJ3QND4
LinkDB
Position
1:complement(2542395..2542802)
AA seq 135 aa
MSELTKTLLNIRSLRAFARELTIEQLEEALEKLTTVVGERQEAEAEERAAKEAREAKLSE
YAQMIAQDGIDVEDLIAALSGESKGKAKSKRAPRPAKYKYVDASGAEKTWTGQGRTPSAI
QTALDAGKSLEEFEI
NT seq 408 nt   +upstreamnt  +downstreamnt
atgtctgaattaaccaaaactctactaaatattcgtagcctgcgtgcatttgctcgtgag
ctaactatagaacaactagaagaagcactagaaaaactgactactgttgttggtgaaaga
caagaagcggaagcagaagaaagagcagcgaaagaagcacgcgaagctaaattaagcgag
tacgctcaaatgattgctcaagacggtattgacgttgaagatcttatcgctgcactatct
ggtgaatctaaaggtaaagcgaagagtaaacgtgctcctcgtccagcaaaatacaaatat
gtagacgcaagtggcgctgaaaagacttggactggtcaaggccgtacgccttccgcaatc
caaacagctctagatgcaggtaaatctctagaagaattcgaaatctaa

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