Vibrio mediterranei: BSZ05_12295
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Entry
BSZ05_12295 CDS
T04936
Name
(GenBank) hypothetical protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh00300
Lysine biosynthesis
vsh00470
D-Amino acid metabolism
vsh01100
Metabolic pathways
vsh01110
Biosynthesis of secondary metabolites
vsh01120
Microbial metabolism in diverse environments
vsh01230
Biosynthesis of amino acids
Module
vsh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BSZ05_12295
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BSZ05_12295
Enzymes [BR:
vsh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BSZ05_12295
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
BBS7_hp
Motif
Other DBs
NCBI-ProteinID:
ASI90491
UniProt:
A0AAN1FH32
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All DBs
Position
1:complement(2620678..2622258)
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AA seq
526 aa
AA seq
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MKNQALLEESVKQLSTILETQQQLLAEHKANQNYAERLENILTPTDELTTQGDDLLIGGC
KATDLIEQYGSPLFVLSEDTLRNNLRRVKNAFGNYWPKPVNVMFAIKSNTNFAVRAICNE
EGVGGDCFGPGEVEATYIAGADPKTIALNGTVKPELAIRKAIEYGYAIHLDSYEEIEIVE
RIAREVKPAEKVRIAVRLKVIPEDFFNDFEPDAYPFPNFIGAMKWIKFGLLKEEAKKIVN
RVKEIDIFEFYGFHTHLGRFSKQPEGWDALYREYARNIIEISRECGVQPFQVDLGGGWPR
EREPECRSKEHMMNPNTIEDYAKVVCGGMLEEFTKEGFEVPQLWLEPGRYIAGNIGTLLT
SVYVVKDDQEMDYTYTMVDASTYLATLVESQESKNPVLPANKMNQPLVERTTEIAGPICI
PSIWESGARMPALQPKDVLAIMDVGHYAESQASQFNSLPRPATVLVKDGEAELIKRAETV
EDVFATQILPERFVKAKAEIEKKMAKPAGKKATTKRRVARTPSYSK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcaagcgcttttagaagagtctgtaaagcaactgagcactattttagagaca
cagcaacagcttctagcagagcacaaagctaaccagaactatgctgagcgtcttgagaac
attctgactccaaccgatgagctaaccactcaaggtgacgacttattaattggtggttgc
aaagccactgatcttatcgagcaatacggtagcccgctgttcgtgttgagcgaagacacg
cttcgtaacaacctgcgtcgtgtgaaaaacgcgtttggcaactactggccaaaaccagtc
aacgtgatgtttgctatcaagtcgaataccaacttcgcggttcgagctatctgtaacgaa
gaaggcgtcggcggtgattgctttggtccaggtgaagttgaagcgacatacattgctggc
gcagatccaaaaaccatcgcactaaacggtaccgttaagcctgaacttgctatccgtaaa
gcaattgaatatggctacgcgattcacctagattcttacgaagagattgaaatcgttgag
cgcatcgctcgcgaagtgaaaccagcggaaaaagtacgtatcgcggttcgtctaaaagta
atccctgaagatttcttcaatgacttcgaaccagatgcttacccgttccctaactttatc
ggcgcgatgaagtggatcaaattcggcttgctgaaagaagaagcgaaaaagatcgtcaac
cgcgtaaaagaaatcgacatcttcgaattctacggtttccacactcacctaggccgcttc
tctaaacagcctgaaggttgggatgcgctataccgcgaatacgcacgcaacattatcgaa
atatctcgtgagtgtggcgttcaacctttccaagttgacctaggcggcggttggccacgt
gagcgtgagcctgagtgtcgtagcaaagaacacatgatgaacccgaacaccatcgaagac
tacgcaaaagtagtgtgtgggggcatgctagaagagttcactaaagaaggcttcgaagta
ccacaactgtggctagaaccaggtcgttatatcgcaggtaacatcggcacgctacttacc
tcggtatacgttgtgaaagacgaccaagagatggattacacctacaccatggttgatgca
tcgacttacctagctacattggtcgagtctcaagagtcgaagaacccagttcttccagca
aacaaaatgaaccaaccattggtagaaagaaccactgaaatcgcaggcccaatctgtatc
ccatctatctgggaaagcggcgcacgcatgccagctctacagccaaaagacgtgctagcg
attatggatgtcggtcactacgctgaatctcaagcgagccagttcaactcactaccacgc
ccagcaacagtgctagtgaaagacggcgaagcggaactgatcaaacgcgctgaaacggtt
gaagatgtattcgcaacgcaaattcttccagagcgctttgtaaaagcaaaagctgaaatt
gagaagaaaatggcgaagcctgctggtaaaaaggcaacaactaaacgccgcgtggcaaga
acgccgagttattcgaaataa
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