Vibrio mediterranei: BSZ05_12440
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Entry
BSZ05_12440 CDS
T04936
Name
(GenBank) DeoR family transcriptional regulator
KO
K02430
DeoR family transcriptional regulator, L-fucose operon activator
Organism
vsh
Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsh03000
]
BSZ05_12440
Transcription factors [BR:
vsh03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
BSZ05_12440
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_PafC
HTH_12
E3_UFM1_ligase
HTH_Crp_2
MarR
HTH_6
HTH_24
IF2_N
CILP_C
HTH_29
HTH_36
MarR_2
Fe_dep_repress
HTH_5
DUF1670
HTH_20
Put_DNA-bind_N
Mga
HTH_38
FeoC
Rrf2
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ASI90519
UniProt:
A0AAN1FH34
LinkDB
All DBs
Position
1:2655319..2656089
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AA seq
256 aa
AA seq
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MQAITRANFILGLISKVGQVSVQDLASELNVSVETIRRDLKTLDKKGELIRTHGGAISKR
YIDEGTSFTNRASSNMQDKQDLAKQVIEHIYEGAVIGLDASSSSWLVAQALPDIRCTIVT
NSLNNIGVLSGKKNITIISLGGHYSEKYKSFYGLIAKNTLQEMALDLSVISCVGFDEHSG
VWDSNEYNYEIKKTLIQVSSKNILIADKNKYKKRSLLKICNFCEIDILISNAEIESDIHG
DMNSISNPNKCMITPI
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaattaccagagcgaattttatcttgggtttaatttcaaaggttggtcaagtt
tcagttcaagacttggcatcggaattaaatgtgtcggtggaaacaattcgccgagacctt
aaaacgctagataaaaaaggtgaattaattcgtactcatggtggcgctataagcaaacgt
tatattgatgaaggaacgtcgtttactaatcgagcctcaagcaatatgcaagacaaacaa
gatttggctaaacaagttattgaacatatttatgaaggtgccgttatcggtttagacgct
agctcttcaagttggctagttgctcaagcattacctgatattcgttgtacgattgtaacc
aactcattgaataatattggtgtcctatctgggaaaaagaatataacgattattagctta
ggtggacactattcagaaaaatacaaatcattctatggtttgattgccaaaaatactttg
caggaaatggcgctggacctgagtgtaatctcgtgtgtgggctttgatgaacatagtggt
gtgtgggattcgaatgaatacaattacgagataaaaaagacgctcatccaagtgtcgagc
aagaatattcttattgcggataagaataaatacaagaaacgaagtttattaaaaatatgt
aatttttgtgaaatcgatatattgatttccaatgcggaaattgaaagtgatattcatggt
gatatgaattcaatttcaaatccaaataagtgcatgataacaccaatataa
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