Vibrio mediterranei: BSZ05_12835
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Entry
BSZ05_12835 CDS
T04936
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vsh
Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsh03032
]
BSZ05_12835
03400 DNA repair and recombination proteins [BR:
vsh03400
]
BSZ05_12835
Enzymes [BR:
vsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BSZ05_12835
DNA replication proteins [BR:
vsh03032
]
Prokaryotic type
DNA Topoisomerases
BSZ05_12835
DNA repair and recombination proteins [BR:
vsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BSZ05_12835
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Peptidase_M13_N
ApbA
Motif
Other DBs
NCBI-ProteinID:
ASI90596
UniProt:
A0A2C9PDG5
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Position
1:2738689..2741331
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AA seq
880 aa
AA seq
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MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLNEVIDGCLAYIKNEDITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV
YMRSKAEIEEDKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYSQTQLQTTFGINMVALNNGQPQLFNLKDMLKCFVDHRREV
VTRRTIFELRKARDRAHILEALSLALANIDEVIELIKNAPTPAEAKVGLVSRGWELGSVA
SMLERAGTDAARPDWLEDQYGIRDGLYYLTEQQAQAILELRLHRLTGLEHEKILDEYKAL
LEEIAELMHILASTERLMEVITEELELVQATYGDERRSEITAAVHDIDMEELIAREDVVV
TLSHEGYVKYQILSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILCFSTRGKTYR
LKVYQLPLASRTARGKPIVNILPLEEGERITAILPVSEFSPEKFIFMATGDGTVKKTSLD
QFSNVRANGLIAVNLRDDDSLIGVDITDGQSDIMLFSKQGKVVRFSEDKVRAMGRTAAGV
RGMKLADEDQVVSLIVPSNQGDILTVTQNGYGKRTELEEYPTKGRATQGVVSIKVSERNG
PVVGAIQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTASDESVVGLQRIDE
VEELELPEGEEVEANAETQAPESGDLAADDSAADDSATEE
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctagctaaagagatcacgcccgtaaacattgaagatgagctgagaggctct
tatctcgactacgcgatgtcagttatcgtgggtcgtgctcttccagatgtgcgtgatggt
ctaaaacctgttcaccgccgcgttttattcgcgatgaatgttctaggtaatgattggaat
aaaccatataaaaagtctgcccgtgtggtcggcgatgtaatcggtaagtatcacccacac
ggtgatagtgcggtatacgacaccatcgttcgtatggcgcagcctttctcacttcgctac
atgttggtcgatggtcaaggtaacttcggctcgattgacggcgactctgcggcggcaatg
cgttataccgaagtccgcatggcgaaaatcgctcatgagttgctagcggatctagacaaa
gagacggttgactacgttcctaactatgatggaacggaacaaattccagccgtactaccg
acaaaaattccaaaccttttggttaatggtgcgtcaggtatcgctgtaggtatggcgaca
aacattccaccacataacttaaacgaagttattgatggctgtttggcatacatcaagaat
gaagacatcacgattgacgagctcatggattacatcccgggcccagatttcccgacagcg
gcactgatcagtggtcgtaaaggcatcatcgatgcttacaagacgggtcgtggtaaggtc
tacatgcgttctaaagcagagatcgaagaagacaagaatggtaaagaaaccatcattgtt
accgagatcccttatcaggtgaacaaagctcgcttaatcgaaaagattgcagagctagtt
aaagataagaaagtagaaggcattagcgcactacgtgatgagtctgataaagacggtatg
cgcattgttatcgaatgtaagcgtgacgcagtaggtgaagtggttctaaacaacctgtac
tcacagactcagctgcaaacgacattcggcatcaacatggttgccctaaacaatggtcag
ccacagctgttcaaccttaaggacatgctgaagtgctttgttgatcaccgccgtgaggtt
gtgactcgccgtactatcttcgaacttcgtaaagcaagagaccgtgctcacattctagag
gcgctatctctagcacttgcgaacatcgatgaagttattgaacttatcaagaacgcacca
acaccagctgaagcaaaagtaggcctggtttctcgtggttgggagctaggtagcgtagct
tctatgctagagcgcgctggtaccgatgcagctcgtccagattggctagaagaccaatac
ggtattcgtgacggtctgtactacctaacggaacaacaagctcaagcgattcttgaactt
cgcctacaccgtttaactggtctagagcatgagaagattcttgacgagtacaaagcactt
ctagaagaaattgcagaactgatgcacattcttgcaagcacagagcgcttgatggaagtg
atcaccgaagaacttgaactagttcaagcaacttatggtgatgagcgtcgtagtgaaatc
acagcggcggttcacgacattgatatggaagagctaatcgctcgtgaagacgtagtagtc
actttgtctcacgaaggttatgtgaagtatcaaatcctaagcgactacgaagcacagcgt
cgtggtggtaaaggtaagagtgcgactaagatgaaggaagaggattacatcgagcgtctg
cttgttgcaaatactcacgacaatatcttgtgcttctctacgcgcggtaagacttaccgt
ctgaaagtgtatcaattgccactcgcaagtcgtactgctcgtggtaagcctatcgttaac
attcttccactagaagaaggtgagcgtattacggcgattcttcctgtaagtgaatttagc
ccagagaaatttatctttatggcgactggtgacggtaccgttaagaagacttctctagac
caattctctaacgttcgtgcaaacggcctaattgctgtaaacctacgtgatgatgattcg
ctaatcggcgttgatatcaccgatggtcaaagtgacatcatgctgttctcgaagcaaggt
aaagtagttcgattcagcgaagacaaagtacgtgccatgggtcgtactgcggcaggtgtc
cgtggtatgaaactggcagatgaagaccaagtggtgtcgttgattgttccttctaaccaa
ggtgacattctaaccgtgacacaaaatggttacggtaagcgtactgagcttgaagaatac
ccaacgaaaggtcgtgcaacacaaggtgttgtatctatcaaagtttctgagcgaaacggt
ccagtcgttggcgcgattcaagttgaagaaggcgacgaaatgatgatgatcactgacgca
gggacgctagttcgtactcgtgttgctgaagtgagtcaagttggtcgtaatactcaaggt
gtcacgcttatccgcaccgcgtctgacgagtcagtcgttggtttgcagcgtattgatgaa
gtcgaagagttagagttaccagagggcgaagaagttgaagcaaatgcagagactcaagcg
ccagaatctggagatttagcggctgacgactcagcggctgacgattctgctactgaagag
taa
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