Vibrio mediterranei: BSZ05_16035
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Entry
BSZ05_16035 CDS
T04936
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
vsh
Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vsh03009
]
BSZ05_16035
Enzymes [BR:
vsh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
BSZ05_16035
Ribosome biogenesis [BR:
vsh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BSZ05_16035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ASI91191
UniProt:
A0AAN1FID1
LinkDB
All DBs
Position
1:complement(3441897..3442595)
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AA seq
232 aa
AA seq
DB search
MRLDKFLCDALGATRKEATKIIKSGDVTVDGVVQKSGAFKVTEDNSVEWQDREVRMQGPR
YIMLFKPDGFVCSHEDGFNHTAFVLLDEVKMENLHFAGRLDVDTTGLVLITDDGQWSHRI
TSPKHKCAKTYRVWLADPVQDNYIKAFEEGIELRNEKALTLPAQLEIIDEKEVLLTIHEG
KYHQVKRMFAALGNKVEGLHRESVGDIVLDEMLEPGEYRYLTQEEIDSVWKK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagataagtttttgtgtgacgctttaggcgcaacacgtaaagaagcaacaaaa
atcattaaatccggtgatgttaccgttgatggcgtagtacaaaagagcggtgcatttaaa
gtcactgaggataacagtgtcgaatggcaagatagagaggtccgcatgcagggtccgcgc
tatatcatgctattcaaaccagatggctttgtttgttctcatgaagatggctttaatcac
actgcgtttgtgttgctcgatgaggtcaaaatggagaaccttcattttgcaggtcgctta
gatgttgatactacaggtttggtgttaattacagatgatggtcaatggtctcatcgaatt
acctcaccgaaacataaatgtgcaaaaacttatcgcgtatggttagcagaccctgtgcaa
gataattacatcaaggcattcgaagagggcattgagcttagaaatgagaaagcgctaact
ctgccagcacaacttgaaattattgatgaaaaagaagtgttattaaccattcacgaaggc
aaatatcaccaagtcaagcgtatgtttgcggcgctaggtaataaagttgaaggcctacat
cgtgaaagcgtcggtgacattgttcttgatgaaatgcttgagccaggagagtatcgatat
ctcactcaagaagaaattgactctgtctggaaaaagtaa
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