Vibrio mediterranei: BSZ05_16380
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Entry
BSZ05_16380 CDS
T04936
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh00190
Oxidative phosphorylation
vsh00860
Porphyrin metabolism
vsh01100
Metabolic pathways
vsh01110
Biosynthesis of secondary metabolites
vsh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
BSZ05_16380
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
BSZ05_16380
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
vsh01006
]
BSZ05_16380
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vsh03029
]
BSZ05_16380
Enzymes [BR:
vsh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
BSZ05_16380
Prenyltransferases [BR:
vsh01006
]
Compound prenylation
Protoheme farnesyltransferase
BSZ05_16380
Mitochondrial biogenesis [BR:
vsh03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
BSZ05_16380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
TMEM107
DUF5058
DUF1129
Motif
Other DBs
NCBI-ProteinID:
ASI91256
UniProt:
A0AAN1FII3
LinkDB
All DBs
Position
1:complement(3522252..3523118)
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AA seq
288 aa
AA seq
DB search
MLKNYLTITKPGIIFGNMVSTAAGFFLAAKSEHVDITLFFAALVGVGLVIASGCVVNNIF
DRDIDQKMERTKHRDLVQGYVNMDVAFVYALFLLLVGTALLYQMTNPLSAVVVLIGYVFY
VFFYTMWYKRHSVYGTLIGSISGAVPPLVGYLAVTNYLSVESVLLFLLFCLWQMPHSYAI
AIFRMEDYRQAGIPVLPVKEGLNKANQHIRHYVLAFCAVAAALFFVGEANYEYLIVVGAM
SAFWARVTFRDMNSSNYIDWSKAVFKVSLLVVTSFSGVLGLELLPLHF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaaattatctgacgattacaaaaccaggtattatttttggcaacatggtctca
acagcggcagggtttttccttgccgctaaaagtgagcatgtcgatattaccttgttcttt
gcagcactcgttggtgtggggctagtcatagcgtcaggttgtgttgtaaacaatattttc
gatagagatattgaccagaagatggagcgaactaaacatcgcgatttagttcagggttat
gtcaatatggatgtcgcgtttgtctacgcgctattcctcttgcttgttggtacggcgttg
ttatatcagatgaccaatccactatctgcggttgttgtgctcatcggctatgtcttctac
gtgttcttttacaccatgtggtacaagcgacattcagtgtatggaaccttgatcggaagt
atctcaggagcagtacctccacttgtcggttacttagcggtcactaattacttgagcgtt
gaatctgtcttattgttcctgttgttctgtctttggcaaatgccacactcttacgctatt
gcgatttttcgaatggaagactatcgtcaagcgggtattcctgttttacctgttaaggaa
ggcctgaataaagcgaaccaacatattcgacactatgtgttggcattttgcgcggttgct
gccgcacttttctttgttggtgaggcgaactacgaatatctgattgtggtaggagcgatg
agtgcgttctgggctcgagttacattccgcgatatgaatagcagcaattatattgattgg
tccaaagcggtatttaaagtttcgttgctggtggtgacaagtttcagcggagtgctagga
ctagagctactaccccttcatttttaa
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