Vibrio mediterranei: BSZ05_19105
Help
Entry
BSZ05_19105 CDS
T04936
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh00250
Alanine, aspartate and glutamate metabolism
vsh00310
Lysine degradation
vsh00350
Tyrosine metabolism
vsh00650
Butanoate metabolism
vsh00760
Nicotinate and nicotinamide metabolism
vsh01100
Metabolic pathways
vsh01120
Microbial metabolism in diverse environments
Module
vsh_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BSZ05_19105 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BSZ05_19105 (gabD)
00310 Lysine degradation
BSZ05_19105 (gabD)
00350 Tyrosine metabolism
BSZ05_19105 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BSZ05_19105 (gabD)
Enzymes [BR:
vsh01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BSZ05_19105 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BSZ05_19105 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BSZ05_19105 (gabD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aldedh
MERS-CoV-like_ORF5
Motif
Other DBs
NCBI-ProteinID:
ASI91941
UniProt:
A0AAN1FJT6
LinkDB
All DBs
Position
2:534511..535938
Genome browser
AA seq
475 aa
AA seq
DB search
MQQINNKSLLSFMVTAADNAVAVINPATGELVGHAPISSEPELMDAIERAHVAQKEWAKV
PAKSRAVLLNRWYQLILENKDDLARIMTVEQGKPLAEAAGEVLYGASFIEWFAEEAKRTY
GDSIPGPTADKRLVTIKQPIGVACAITPWNFPIAMITRKAGPALAAGCSFVVKPSDSTPL
SAFAIVELAYQAGIPKDALQVVLGESSRKIGAIFTSHPLIRKLSFTGSTQVGSVLMQQAA
KDIKRTSMELGGNAPFIVFDDADIDAAVQGAMASKFRNAGQTCVCANRFYVHSKVYDEFV
TKFDAAVQQLKVGNGLDEGINIGPVINASAKQGIQALIDRAVEQGAVPVTPLKQLDGLFM
QPVVLKDVKHSMDIVQEEIFGPVAPVIRFDTDEELIEMANDTIYGLASYFYSQNIHRVWK
VAEALEYGMVGINEGIISTEVAPFGGVKQSGIGREGAKQGIDEYMDVKYLCFGGN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaataaataataagagcttactctcctttatggtaacggcagcggacaacgct
gtagccgtgataaacccagcaacaggcgaacttgtgggtcatgctcctatttcatctgaa
cctgagctgatggatgctattgagcgagctcatgtggcgcagaaagagtgggccaaagtg
ccggctaagtcgcgcgcagtattattaaaccgctggtatcaattaattcttgagaacaaa
gacgaccttgcgcgcatcatgactgttgaacagggtaagccattggcagaagccgcgggt
gaggttctgtatggtgccagctttatcgaatggtttgctgaagaagccaaacgcacctat
ggtgattccattccgggaccaacggcagacaagcgcttggtaaccatcaagcagcctatt
ggtgtcgcatgtgcgattacgccatggaacttccctatcgctatgatcacacgtaaagca
ggtcctgcattggctgccggttgtagtttcgtcgttaagccatcggattcaacaccgctg
tctgcatttgcaattgtggaactcgcgtaccaagcgggcattccgaaagacgcgctacaa
gtggttctaggtgagagctcacgcaaaatcggtgcaatcttcacttctcacccactgatt
cgcaagctgtctttcacaggttctacccaagtgggcagtgtgttaatgcaacaagccgca
aaagacatcaaacgcacgtcaatggaactgggtggtaatgcgccattcatcgtcttcgat
gatgctgatattgatgcagctgtgcagggcgctatggcctctaagttccgtaatgcgggt
caaacttgcgtctgtgcgaaccgattctatgtgcatagtaaagtgtacgatgagttcgta
acgaaatttgatgcagcagtgcagcagttaaaagtcggaaacggcttagatgaaggtatc
aacattggtccagttatcaatgcgagtgcaaaacagggcattcaagcactgattgaccgt
gcggtagagcaaggtgcagtgcctgttactcctcttaaacaactagacggtttgtttatg
cagccagtcgtcctcaaagacgtgaaacacagcatggatatcgttcaagaagagatattt
ggtccggtggctccggtaattcgttttgatacggatgaagaacttatcgaaatggcgaac
gacacgatttacggtttggcgtcctacttctacagccagaacatccaccgtgtttggaaa
gtagcagaagcactggaatacggcatggtcggcattaatgaaggtattatctcgacagaa
gtagcgccgtttggcggtgtgaagcagtcgggtattggacgtgaaggtgcgaagcagggc
atcgacgaatatatggatgtgaaatacctgtgctttggtggcaactaa
DBGET
integrated database retrieval system
