Vibrio mediterranei: BSZ05_19995
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Entry
BSZ05_19995 CDS
T04936
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
vsh
Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsh03000
]
BSZ05_19995
Transcription factors [BR:
vsh03000
]
Prokaryotic type
Helix-turn-helix
Other families
BSZ05_19995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
AAA
AAA_2
nSTAND6
HTH_30
AAA_3
HTH_22
Mg_chelatase
HTH_7
HTH_50
DUF3967
HTH_29
AAA_6
HTH_17
CNOT1_HEAT
HTH_11
AAA_22
HTH_28
nSTAND3
TsaE
Motif
Other DBs
NCBI-ProteinID:
ASI92099
UniProt:
A0AAN1KQ43
LinkDB
All DBs
Position
2:complement(728818..730596)
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AA seq
592 aa
AA seq
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MIVTHTETNKAWIKDSWKRSIQAGLNSRRHPEDKRLSNQEVTERVDHHQPLIHVVEKHAY
PLFCQIFSRTDSRLILADTSGVILKTWGQKRFREKLTEIALDQGVLWDEGLKGTNAIGSA
IIERRPVSVIGGEHFIRHHHFISCTASPIFSPSGELIAILDVTSEYQTHNDATQVLIQNM
VQNIESELLNFIPDAALKIRLGHDSSVLESGWQGIVVTDKHGQVLAQNAIASSVLANQLR
TGDPIGSVIDSLTLNRIRKTDQFYYQVESVKPMSTATGSKLRSLQPKTCPIHQGDETIEV
AWQQATKVMDKKIGLVISGETGTGKNELVKALHKQSSLANKPLVSINCGALPNDLIESEL
FGYAPGAFTGANPKGFEGRFRQANGGILFLDEIADLPLNAQSRLLHVLQDKVVVPLGGTQ
SYPVDVYVIVASHKNLSEMVNNGEFREDLWYRLEGLSITLPSVRERMDKQLLIKTIFSKH
SKNQTLSDDVLELLTQYSWPGNIREIQSTCRLLAALCDHSSVEMADVPATVQDKLRNYKQ
SENATSLASTLDEKLIKTIRDANGNVSLASRILGISRNTIYRKLKKLGINTA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcactcatactgaaaccaataaagcttggataaaggactcgtggaagcgaagt
attcaagccggtctaaacagccgacgacatcctgaagataagagactctccaaccaagaa
gtcactgagcgagtagatcaccatcaaccactaatccatgtggttgaaaaacatgcgtac
ccgctgttttgtcagattttttctcgtactgatagtagacttattttggctgataccagt
ggtgtaattctcaaaacttgggggcaaaaacgttttagggaaaagctgactgagatcgcc
cttgatcaaggcgtgctatgggatgaagggttaaaaggcactaacgcgatcggttcagcc
atcatagaaaggcgccctgtttctgtcattggtggcgagcatttcatccgtcaccaccac
tttattagttgtacagccagtcctatcttctctccttcaggtgagctgatagccattctt
gatgtgaccagtgaataccaaacacataacgacgcgactcaggtcttaatccaaaatatg
gtgcaaaacatcgaaagtgagttgctaaacttcattcctgatgccgcgttaaagatccga
cttggtcatgacagctcagttctagagagtggttggcaaggcatcgtggtgacagacaaa
cacggtcaagtgttagcacaaaacgccattgcttcgagtgtattagctaatcaattacga
acgggtgatcccatcggctcagtgatagattctctaacattgaatagaatacgaaaaacg
gaccagttttattatcaagttgaatccgttaaaccaatgtctaccgctacgggttctaaa
ttaagaagccttcaacctaagacctgcccaattcaccagggagatgaaaccattgaggtc
gcttggcagcaggcgactaaagttatggataaaaagattggtcttgttatatcaggtgaa
actggcacaggtaaaaatgaactagtaaaagcactgcataaacaaagctctctagctaat
aaacctctagtttccattaactgtggcgctctgcctaatgatctcatcgaatcagaacta
tttggttatgctcccggcgcctttactggcgctaatcctaaagggttcgaaggacggttt
cgccaagccaacggtgggattctctttctcgacgaaatagcagaccttcccctcaatgct
caatctcgtttacttcatgttttacaggataaagtcgttgtccccctcggaggaactcaa
agctaccctgttgatgtttatgtcatcgttgcaagtcataaaaacctgtccgaaatggtg
aacaacggagagttcagagaagatctctggtatcgacttgaagggttaagtattacttta
ccctcagttagggagcgtatggataagcaactattgattaaaacaatattttcaaaacac
tctaaaaaccaaacgctttccgatgatgtgcttgagcttttgactcaatactcatggcca
ggaaacattcgcgaaattcaatccacctgccgcttactcgctgcactatgtgaccattct
agcgttgaaatggccgatgttcctgccactgtccaagacaaactcagaaactacaaacag
agcgaaaatgcaactagcttagcctctacgttagacgagaaacttatcaagactattcgt
gacgccaacggaaacgttagcctagcatccagaattcttggtattagccgcaacaccata
tatcgtaagctcaagaagcttggcatcaacactgcgtag
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