Vibrio mediterranei: BSZ05_20665
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Entry
BSZ05_20665 CDS
T04936
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh03030
DNA replication
vsh03430
Mismatch repair
vsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSZ05_20665
03430 Mismatch repair
BSZ05_20665
03440 Homologous recombination
BSZ05_20665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsh03032
]
BSZ05_20665
03400 DNA repair and recombination proteins [BR:
vsh03400
]
BSZ05_20665
Enzymes [BR:
vsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSZ05_20665
DNA replication proteins [BR:
vsh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSZ05_20665
DNA repair and recombination proteins [BR:
vsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSZ05_20665
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ASI92222
UniProt:
A0AAN1FKD9
LinkDB
All DBs
Position
2:complement(876242..876865)
Genome browser
AA seq
207 aa
AA seq
DB search
MMLSSAKSVVVLDFETTGLSPNQGDRAIEIGAVKLENGTVVDRFQSLMNPGFRVSGFIEN
YTGISNAMLANAPSCKDVMGEFSTFIQNSNLVAHNASFDKRFLDAELELINESYTGEFAC
SLLVSRRLNQEAHSHKLGDLVAYHNIANDGVFHRALADAEVTASLWLLLVDSLTERFQIN
DPSFALMQRLSKQPKASIAQFLTKQAG
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgatgctttcatctgccaaatctgtcgtagtactcgactttgagaccactggtctttca
ccaaatcaaggcgacagagctattgaaattggtgcagttaagctagaaaacggcaccgta
gtcgataggtttcaatccctcatgaatccgggatttcgtgtcagtggatttatcgaaaat
tacactggcatcagtaatgccatgctggctaacgcgccaagctgtaaagacgtgatgggt
gagttttcaactttcatacaaaacagtaatctcgttgctcacaatgcttcgttcgataag
cgatttctggatgcagagctagaactaatcaacgaaagttacacgggggaatttgcctgt
tctcttctagtctcaagacgtttaaatcaggaagctcactcccacaaactcggcgactta
gtggcttatcataatattgctaatgatggcgtctttcaccgtgctttagccgatgcagaa
gtgacagcatcactatggttgctcctcgttgattcattgactgaaagattccagatcaat
gatcctagttttgctttaatgcaaagactgtccaaacaaccgaaagcatcgatagctcag
ttcttaacaaaacaagctgggtaa
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