Vibrio mediterranei: BSZ05_22960
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Entry
BSZ05_22960 CDS
T04936
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vsh
Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsh03400
]
BSZ05_22960
DNA repair and recombination proteins [BR:
vsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BSZ05_22960
Archaeal homologous recombinant proteins
BSZ05_22960
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Metallophos_3
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
ASI92638
UniProt:
A0AAN1KQL3
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All DBs
Position
2:complement(1372351..1373496)
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AA seq
381 aa
AA seq
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MKFIHTSDWHLGRQFHNVSLLEDQKQVLNQITRYVTENQIDAIVIAGDIYDRSVPPTAAI
EVLDGFLNHMVQDLNVPVIMISGNHDGAKRLGFGSKQFDKAGLHIISSLEQLCTPVEIVS
GQDRVVHFYGMPYSDPETVRHHYDIQINNHDDAHAYLASQIGNVLDKDVHNIVISHCFID
GAETCESERTLSIGGADRVSYEHFKSFDYVALGHLHQAQKRGLETIRYSGSIMKYSFSEQ
HHRKSVTLVEICDESGEITTRTLPLNAPHDMRVLEGELEHLLELGRSDANFDDYLLVRLT
DKHAILDPMAKLREVYPNVLHLEKPGMLVGVDKELSQARLGRSEVDMFRDFFLEVQGDEM
TDNQKDMLSEVVMSLKKQSEE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatccatacctctgattggcatttagggagacagtttcacaatgtctctttg
cttgaagatcaaaagcaagtcttgaaccaaatcactcgatacgttactgaaaaccaaatt
gacgccatagtcattgctggtgatatctatgaccgttcagtaccaccaactgcagctatt
gaagtgctcgatggttttttgaatcacatggttcaagatttgaacgtgccggtaattatg
atttccggtaaccatgacggggcaaagaggttgggattcggttcaaagcaattcgataaa
gcaggcctacacatcattagttcacttgagcaactctgtactcctgtcgagattgtttcc
ggtcaagatagagttgttcacttctatggtatgccttatagcgaccctgaaacggtgagg
caccattatgatatccaaatcaataatcatgacgacgctcacgcgtaccttgcctcccag
atcggtaatgtcttagataaagatgtacataatatagttattagccattgttttattgat
ggtgctgagacttgtgaatcggagagaacattatcaatagggggagccgatcgtgttagc
tatgaacattttaagtcgtttgattacgtcgcgttaggccatcttcatcaagctcaaaaa
cgaggactagaaaccattcgctattcaggctcgatcatgaagtattcgttttcagaacag
catcatagaaaaagcgtgacgttggtggaaatctgcgatgagagtggcgagataaccaca
agaactttgcctttaaacgctccgcacgatatgcgagtgcttgagggagagttagagcac
ttacttgaactaggtcgaagcgatgcaaattttgatgattatctattggtaagactgacg
gataagcacgcgattctcgatcctatggcgaagttaagagaggtctacccaaacgtactt
catttagaaaagcctggaatgttggtcggtgtggataaagaattatcacaagcccgttta
ggtcgttctgaagtggatatgttcagggactttttcctggaagtccaaggtgacgaaatg
acagacaatcaaaaggacatgttatcagaagttgtgatgtcgttgaaaaagcagtctgag
gagtaa
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