Vibrio mediterranei: BSZ05_23305
Help
Entry
BSZ05_23305 CDS
T04936
Name
(GenBank) DUF5116 domain-containing protein
KO
K01200
pullulanase [EC:
3.2.1.41
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh00500
Starch and sucrose metabolism
vsh01100
Metabolic pathways
vsh01110
Biosynthesis of secondary metabolites
Module
vsh_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
BSZ05_23305
Enzymes [BR:
vsh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.41 pullulanase
BSZ05_23305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pullul_strch_C
Pullulanase_N2
PUD
CBM_48
Pullulanase_Ins
Alpha-amylase
SusG_CBM58
X25_BaPul_like
Cupredoxin_1
Motif
Other DBs
NCBI-ProteinID:
ASI93343
UniProt:
A0AAN1KR98
LinkDB
All DBs
Position
2:complement(1458322..1461954)
Genome browser
AA seq
1210 aa
AA seq
DB search
MTVVAKTLIPLISIVLLAGCNTNSESGTEAGGNSGDVDGLYKAGENEVVIYYKRDSAAQS
GDPYAGWGLHLWNGEGCESTDLEAMNIGDGGTSWDAPFGYTGISSTYGAYYVLKVNPDAS
NPHECMNFILHKGDEKAFGSGNHKVQLRQLDDNKGLFGFHGSSQIYYVPTADRPVAIDGR
AAHWLDGTTIGWEAASTADKVVLFYSEDGSITMNDDRSIQGQDGHVELTISGELPETLKA
RYKHLASLTALNIDVNAETRHTLLKNQLVIAAYNKSNKIIAATELQTAGVLDSVFASKEG
GNAIAQTLGAVVEGTDATFKLWAPTAMSVSVEVYNEDKTLDSVYPMAEYADTGIWSSDGV
AGALNKFYRYDVKVYHPTTGKVEQRLVTDPYSLSVSANSLYSQVVDLDDTLLMPEGWNNE
SYSRPQLSKAEDHVLYESHIRDFSFSDSRGTEALNGKYLALTEDTRESVTHLKSLQQAGL
TTLHVLPVFDIATVDEVNRVDITDTVGDLCALNAKAAVCSTADSGQVIEDLLQSYDPASA
NAQSLMNDLRMYDSFNWGYDPFHYTVPEGSYATDAEGSLRIKEFRQMVKATHDMGLKFVM
DVVYNHTNASGVNDKSVLDKIVPGYYHRLNANSGGVENSTCCDNTATENLMMGKLMVDSL
LVWADDYKVDGFRFDLMGHQPKDLMVYALEKVKAIDPDTIFYGEGWDFGEVSNHARFEQA
TQLAMAGTEIGTFSDRLRDAVRGGSPFDGGVNSDGRHSLRFNQGFGNAAYPNEEVIESAE
TTNDRLHNQDIVRLGMAGNLADYVLLDYTGETKRGKDVDYNGAPAGYTKFPSENISYVSK
HDNQTLWDNNAYKIATGIDSAKRARMQTVSLSTVMLGQGIPFIHMGSELLRSKSMQRDSY
DSGDWYNRVRFDGSDNNWNVGLPREDKDGANWDLIRKIIADPSVKPSQTDIELTKQQFLE
LLKIRSSSELFRLDSAEEVMKRVDFRNVGHGQTQGLIVMTIDDGTSAGADLDSAYDAVVV
VVNSTAVTKEFKIEGTSGFELHPVQKSSYDSEVKAASFSNEIFSVPALTAAVFVLPQGES
QGVGLPIDNSNKDVSSIAPFGNTELYLRGSITTWDAPAENSNAKFSYIANNIYQLDIEVQ
TGSFNVKVADASWNAETNFGGEVSVTLGEASTLAAGSNDNVTINIAEEGNYRFRLDATNK
ANPTLTVTKL
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgacagtggtagctaaaacgcttataccactgatttcaattgtattactcgcaggatgc
aatacgaatagtgagtctggaacagaggctggtggcaatagtggcgatgtggatggcttg
tataaggctggcgagaatgaagtcgtcatttattacaaacgtgactcagcggctcaatct
ggtgacccgtacgctggttgggggttacacctgtggaatggcgaagggtgtgaaagtact
gacctagaagcaatgaatattggtgatggtggaacgagctgggatgctccatttgggtat
acagggattagctctacctatggcgcttattatgttctgaaggtgaacccagatgcatca
aaccctcacgaatgtatgaattttatacttcacaaaggagatgagaaagcctttgggagt
ggaaatcacaaggttcaactacgtcaacttgatgacaataagggattatttggtttccat
ggcagtagccaaatttattacgttcctactgctgatagacctgtcgcgatcgatgggcgc
gctgctcactggttagatggtaccacaattggttgggaagctgcctcgacagcagataaa
gtggttctgttctacagtgaagacggcagcatcacaatgaatgatgataggtctattcaa
gggcaagatggacacgttgaactcaccatttctggggagctacctgagacactcaaggct
cgctataagcacctagcgagcttaactgccctgaacatcgatgtgaatgcggagacacga
catacacttttgaaaaaccaacttgtgatagccgcgtataacaagagcaataaaattatt
gctgctactgagcttcaaacagctggagttcttgactctgtatttgcctcaaaagaaggg
ggtaatgcgatagctcaaacacttggtgctgttgttgaaggaactgatgcgacgtttaaa
ctctgggcaccaacagcaatgtcagtatcggtagaagtttataatgaagataagacccta
gatagcgtatatccaatggccgaatatgcggacactggtatatggtcctcggatggcgta
gctggagcactgaacaagttctatcgttacgacgttaaggtgtaccatcctacgacgggt
aaagtagagcagcgattggtaaccgacccatattcacttagcgtgtctgcaaattctcta
tattctcaagttgtagatctcgatgatacgttattaatgcctgaaggttggaataacgaa
tcatattctcgtcctcaattatctaaagctgaggatcatgtcctttacgaatctcacata
cgtgattttagcttcagtgattctagaggaacggaggcattgaatggcaagtatttagcg
ctaaccgaagatactcgagagtcagtaacacatctgaagtcattgcaacaagcaggctta
acaacgttgcatgtattacctgtgtttgatattgctacagttgatgaggtcaatagagtt
gatattaccgatacggtcggtgatctatgtgctcttaatgccaaagctgcggtttgttct
acagcagatagtgggcaagtcattgaagatttgttgcaaagctatgacccggcgagcgcg
aatgcgcagtctttgatgaatgacctacgcatgtatgacagttttaactggggctatgat
ccatttcattacacggttcctgaaggtagttacgctactgacgctgaaggttcactaaga
atcaaagagttccgccaaatggtaaaagcgactcatgatatgggactaaagttcgtcatg
gatgtcgtatataaccacaccaatgcctctggcgtaaatgataagtcagtgttggataaa
attgttcctgggtattatcacaggctcaatgccaattccggaggcgtagaaaactcgacc
tgttgtgacaatactgcgacggaaaacttgatgatgggtaagctaatggttgattcactg
ttagtttgggctgatgactacaaagtcgatggtttccgttttgaccttatggggcaccaa
ccaaaagacttgatggtttatgcgttagagaaagtgaaagcgattgatcccgatactatt
ttctatggtgaaggttgggatttcggtgaagtttctaatcacgctcgattcgagcaagcc
acacagctagctatggccggtactgaaattggtacgttttctgatcgattgcgtgacgca
gtacgtggtggtagtccttttgatggcggcgttaacagcgatggccgccattcactgagg
tttaatcaagggtttggtaatgcggcttatcctaatgaagaggtaatcgaatcggctgaa
acaacaaacgatagacttcacaaccaagatatcgtccgtttaggcatggcgggcaatttg
gctgactatgttctcttggattacactggtgagactaaacgtggcaaagatgtggattat
aatggcgctccggcaggctatacaaagttcccatcggagaatatctcttacgtctcgaag
catgataaccaaacactttgggacaacaacgcctacaagattgcgacagggatagattcg
gcgaagcgagctagaatgcagactgtatcgctttcaaccgtaatgttggggcagggtatt
ccatttattcacatgggctcagagctattgcgatctaagtcgatgcagcgagattcctat
gactcaggtgattggtataaccgcgttcgcttcgatggttcagacaacaactggaatgtt
ggtttacctcgagaagacaaagatggcgctaactgggatttgattagaaaaatcatagct
gatcctagtgtcaaaccgtcccaaacggacattgagctaaccaaacaacaattcttagag
ttacttaaaattagaagtagtagtgagctgttccgcttagatagtgcggaggaggtcatg
aaacgagtcgatttccgtaacgttggtcacggccaaacacaaggtttaattgtcatgacg
attgatgatggaaccagcgcgggcgctgatcttgattctgcatatgatgcggtggtggtt
gtggttaactcaacggcagttactaaggagttcaagattgaaggaactagcggttttgaa
ctacatccggttcaaaaatcgtcttatgatagtgaagtgaaagcagcctcatttagtaat
gaaatcttctctgtaccagcattgacagccgctgtctttgtacttcctcaaggtgagagc
cagggtgtaggcttgccgatagacaacagtaataaagatgtatctagtatcgcaccattc
ggaaatactgaactctacttacgtggttcgatcacgacatgggatgccccagcggaaaat
tccaatgccaagtttagttatattgccaataatatttaccagttagatatagaggtgcaa
acgggaagttttaatgtgaaggtcgccgatgcgtcttggaacgcagagacaaactttggt
ggcgaagtgagtgttactttgggtgaggcaagcacacttgctgcaggtagcaatgataat
gtcactataaatattgctgaagagggaaactatcgtttcaggttggatgcaacaaataaa
gccaatccaacgctgactgtaaccaaactttaa
DBGET
integrated database retrieval system
