Vibrio mediterranei: BSZ05_24505
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Entry
BSZ05_24505 CDS
T04936
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh03420
Nucleotide excision repair
vsh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BSZ05_24505
03430 Mismatch repair
BSZ05_24505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsh03400
]
BSZ05_24505
Enzymes [BR:
vsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSZ05_24505
DNA repair and recombination proteins [BR:
vsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSZ05_24505
MMR (mismatch excision repair)
Other MMR factors
BSZ05_24505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
HHH
AAA_11
HHH_3
HHH_5
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ASI92925
UniProt:
A0AAN1KQV4
LinkDB
All DBs
Position
2:complement(1718919..1720991)
Genome browser
AA seq
690 aa
AA seq
DB search
MAQPITLNHQQQLAVDFGMPKSGNTSNHLPLLIIAGAGTGKTNTLAHKTAQLLVQGVPPE
KILLVTFARRASAELASRANRIAEQQLNEQRKQYHPVKLDWMGTFHSIAARLLREHAALI
GLESDFTIMDRNDAADMLDVLRFELGFTNTDRRFPKKKTCLEIYSRCVNSQTAVEEVVAQ
YFPHCAEWSSELKVLFAQYAEQKAEQFCLDYDDLLLYCFYMAQVPEIANKVRAQFDYILV
DEYQDTNLLQAGMLKAFFPDGRGLTVVGDDAQSIYGFRAASVDNILEFPQQFSPPAKVIT
LATNYRSHQCILDLSNQLLNEGQEGYKVELYSERKQGPKPQLVTVEDDTKQAEYIVESIL
RAREEGIELKRQAVLFRSSYHSDRLELELTRRDIPYVKHGGLKFLEAAHVKDLLSILRWA
DNPKHTISAFRVLKLLAGIGPKTANNIIEHLKAHQYQFSALSDCKVPISAKAEFKTLVES
LLTINSNAVPWAEQLSLLATLYSPLLELNYDDHFVRWGDVEQLVMISGQYSTRERFLTEL
TLDPPQSTGDLASNPKIDDDFLILSTVHSAKGQEWQNVYVLNVADGNFPNEYAVGDKRAL
EEERRLLYVAMTRAKQELHLMQPMKYWVPEQQSWGDKHVYGGKSRFMTDSLCEHLNRVHY
PKIAPDAQDKKIAAKAITDIRKTVLGMWKD
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacccatcactcttaatcaccaacaacagctcgccgtcgattttggtatgcca
aaatcaggcaatacgagtaaccacttaccgctacttattattgctggcgcgggaacgggc
aagaccaataccttagctcacaagacggctcagctgttagttcaaggtgtaccgccagag
aaaatcttgttagtgacgtttgctcgcagggcatcagctgagctcgcttctcgcgcgaat
cgaattgcagagcagcagcttaatgagcagcgtaaacaatatcacccagtcaagcttgat
tggatggggacttttcattctatcgctgcaagattgttgcgtgaacatgctgcccttatc
ggcctcgaaagtgatttcactattatggatagaaatgacgcagcggatatgttggatgtg
ttgcggtttgagcttggttttaccaataccgatagacgttttccaaaaaagaaaacctgc
ttagagatatactctcgttgtgtgaatagccaaactgctgttgaagaggttgtcgcgcaa
tatttcccacattgtgcagagtggagctctgagctcaaggtattgtttgctcagtatgca
gagcagaaagcggaacaattctgtttagattacgatgatttgttactttactgcttttat
atggctcaagtgccagagatagcaaataaagtgcgagctcaattcgattacatattggtc
gatgaataccaagacaccaacttacttcaggcgggcatgctcaaagccttctttcctgat
ggaagagggttaaccgtggtcggtgatgatgcgcaatccatctacggcttccgagcggcg
agtgtcgacaacattctggaatttccacaacagttttctccacctgcaaaagtcattacg
ctcgcaaccaactatcgttcacatcaatgtattttggacttatccaatcaactacttaat
gaaggacaagaagggtataaagttgagctatattcggagcgaaaacaagggcctaaacct
caacttgtcacggtggaggatgacactaagcaagcggaatatatcgttgaatctattcta
agagcgagggaagagggcattgagctgaaacgacaagctgtgctgtttcgctctagctat
catagcgacagattggaacttgagttaacgcgccgtgatattccttatgttaaacatggt
ggcctgaagtttcttgaagccgctcatgttaaagatcttctttctattcttcgctgggct
gataatccaaaacacaccatatctgcttttcgagtgttgaaattgcttgctggtattggc
ccgaaaaccgctaacaatatcatcgagcatttaaaggcgcatcaatatcagttcagtgca
ctatctgactgtaaagtcccgatctcagcaaaagcggagtttaaaacgttagtcgaatct
ctactcacgataaacagtaacgctgtaccgtgggcagaacaattgagtcttcttgcaact
ctctatagcccattattagaactgaattacgatgaccattttgttcgttggggtgatgtc
gagcagcttgtaatgatttccggtcaatacagtacgcgtgaacggttcttgactgagttg
actcttgacccaccgcagtcgactggtgatttagcaagcaaccctaaaatcgatgatgac
tttttaattctctccacggtacacagtgcgaaagggcaagagtggcaaaatgtttatgtt
ctcaatgtcgctgatggcaacttccctaatgaatatgcagtgggcgacaaacgagcgtta
gaagaagaaagacgcttattgtatgtggccatgacgcgtgctaagcaagaactgcatctc
atgcagccgatgaaatattgggtacctgagcaacagagttggggtgataagcatgtgtat
ggaggcaagagccgttttatgacggactctttgtgtgaacacttaaaccgagtgcactat
ccgaaaatagcaccggatgctcaggataaaaaaatcgctgcgaaagcaattaccgatatc
cgtaaaaccgtacttggaatgtggaaggactag
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