Vibrio sinaloensis: MTO69_00640
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Entry
MTO69_00640 CDS
T08230
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vsi
Vibrio sinaloensis
Pathway
vsi00541
Biosynthesis of various nucleotide sugars
vsi01100
Metabolic pathways
vsi01250
Biosynthesis of nucleotide sugars
Module
vsi_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
vsi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MTO69_00640 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsi01005
]
MTO69_00640 (rfaD)
Enzymes [BR:
vsi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
MTO69_00640 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
vsi01005
]
Core region
MTO69_00640 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
ThiF
NAD_binding_4
KR
NAD_binding_10
Phage_T7_Capsid
adh_short
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
UPQ88104
LinkDB
All DBs
Position
1:complement(134367..135308)
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AA seq
313 aa
AA seq
DB search
MIIVTGGAGMIGSNIIKALNEQGINDILVVDNLKNGKKFQNLVDLDIADYMDRDDFLTQI
MAGDDFGPIEAVFHEGACSATTEWDGKYMMLNNYEYSKELLHYCLDREIPFLYASSAATY
GETDKFIEEQQYEGALNVYGYSKQQFDNYVRRIWQDAEEHGEKLSQVTGFRYFNVYGPRE
QHKGSMASVAFHLNNQMNAGENPKLFAGSEHFKRDFVYVGDVAAVNLWFKQNGVSGIFNL
GTGNAESFEEVAKSVIAYHGKGEVETIPFPDHLKGAYQEYTQADLTKLRAAGCDHQFKTV
ADGVAEYMSLINK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtaactggcggtgctggcatgattggcagcaacatcatcaaagcacttaac
gagcaaggcattaatgacattttagttgtcgataaccttaaaaatggtaaaaagtttcaa
aatcttgttgatcttgatatcgctgattacatggaccgtgatgatttcctgactcaaatc
atggcaggggacgactttggccctatcgaagccgtttttcatgaaggtgcctgctctgct
accacggagtgggatggtaagtacatgatgctcaacaactacgagtattccaaagagttg
cttcactactgcttagatcgtgaaatccctttcctatacgcttcttctgccgcaacctat
ggcgaaaccgacaagtttattgaagagcagcaatacgagggtgcgctcaacgtttacggc
tactcgaaacagcagttcgataactatgtacgccgcatttggcaagacgccgaagagcac
ggcgaaaaactgtctcaagtcacaggattccgttacttcaacgtttacggcccgcgcgag
cagcataaaggctcgatggcttcggtcgcattccacctcaataatcaaatgaatgcaggc
gaaaaccctaagttgtttgccggtagcgagcactttaagcgcgattttgtatacgtcggc
gatgttgccgcagtgaacctttggtttaagcaaaatggcgtatcaggtatttttaaccta
ggtacaggtaacgccgagtcttttgaagaggtggccaaatcagtgattgcttatcatggc
aagggggaagtagaaacaattccgttccctgaccacttaaaaggcgcataccaagaatat
actcaggccgatctgactaagctacgtgcagcgggttgtgatcaccagttcaaaacggtc
gctgacggtgtggccgagtatatgtcgctcatcaataagtag
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