Vibrio sinaloensis: MTO69_02420
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Entry
MTO69_02420 CDS
T08230
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vsi
Vibrio sinaloensis
Pathway
vsi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vsi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTO69_02420 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vsi03019
]
MTO69_02420 (pnp)
03016 Transfer RNA biogenesis [BR:
vsi03016
]
MTO69_02420 (pnp)
Enzymes [BR:
vsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MTO69_02420 (pnp)
Messenger RNA biogenesis [BR:
vsi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MTO69_02420 (pnp)
Transfer RNA biogenesis [BR:
vsi03016
]
Prokaryotic type
tRNA degradation factors
MTO69_02420 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
S1_RRP5
KH_2
S1_2
KH-I_KHDC4-BBP
DUF3016
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
UPQ88420
LinkDB
All DBs
Position
1:509929..512061
Genome browser
AA seq
710 aa
AA seq
DB search
MFEKPVVKTFQYGNHTVTLETGVIARQATAAVMVTMDDTSVFVSVVGKKEAVEGQDFFPL
TVNYQERTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPDAFKNEVQVIATVMS
VNPDVQPDIVTMIGTSAALAISGIPFNGPIGAARVGHIDGQLVLNPSNTELETSKLDLVV
AGTEGAVLMVESEADNLTEEEMLSAVVFGHDQQQAVISAINEFAAEVATPAWDWVAPEEN
TALKNRIAELAEAKLVEAYQITEKMARYDRIHEIAGEVNEVLLAEDPEANTKEIHTIFHD
LEKTVVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQALVTATLGTQ
RDAQIIDELTGERKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGKLAKRGIAAVMPSVD
EFPYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTSEGITALQMDIKIEGITKEIMQIALNQAQGARKHILSVMDE
AISGAREDISEFAPRIHTMKISAEKIKDVIGKGGAVIRALTEETGTTIEIEDDGTIKIAA
TEGTAAKEAIRRIEEITAEVEVGRIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRV
EKVSDYLAEGQEVQVKVLEIDRQGRVRLSMKEAVEKTEEAAAEEKPAADA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaaaccagttgttaaaacgttccagtacggtaaccacacagttactctagaa
actggcgttattgcacgtcaagcgaccgcagccgtaatggtaactatggacgatacgtca
gtattcgtttctgttgttggtaaaaaagaagcggtggaaggtcaagacttctttccacta
acggttaactaccaagagcgtacttacgctgcaggtaaaatccctggtggtttcttcaag
cgtgaaggtcgtccatctgaaggcgaaacgctaacggctcgtcttatcgaccgtccaatt
cgtcctctgttcccagacgcgttcaaaaacgaagttcaagttattgccaccgttatgtcg
gtaaacccagacgttcaacctgacatcgttactatgatcggtacatcagcagcgcttgct
atctctggtatcccgttcaacggtcctatcggtgctgcgcgcgttggtcacatcgatggt
cagctagtactgaacccaagcaacactgagctagaaacgtctaagcttgacctggtggtt
gcaggtaccgagggcgctgttctgatggttgagtcagaagctgacaacctaacagaagaa
gagatgctttcagcggttgtgtttggtcacgatcaacagcaagctgttatctctgcaatc
aacgagttcgctgctgaagtcgcgactccagcttgggattgggttgctcctgaagagaac
actgcacttaagaaccgtatcgctgaactcgctgaagcgaaattggttgaagcttaccaa
atcactgagaagatggctcgttacgaccgcatccacgagatcgctggtgaagtgaacgaa
gtgctgcttgctgaagatccagaagcaaacaccaaagaaatccacactatcttccacgat
ctagagaaaacagtagtacgtcgcagtatcatcgcgggtaacccacgtatcgacggccgt
gaaaaagacatggttcgtgcgctagacgtacgcactggtgttcttccacgtactcacggt
tcttcactattcactcgtggtgagacgcaggcactggtaacggcgactctaggtacgcag
cgtgacgctcaaatcatcgacgagctaaccggtgagcgtaaagatcacttcctactgcac
tacaacttccctccatactgtgtaggtgaaacaggttttgtcggttctcctaagcgtcgt
gaaatcggccacggtaaactggctaagcgtggtatcgcggcagtaatgccatcggtagat
gagttcccatacacagttcgtgtcgtatcagaaatcacagaatctaacggttcttcttca
atggcttctgtatgtggtacttctctggcgctgatggatgcgggtgttcctattaaagcg
tctgttgcgggtatcgcaatgggtctagtgaaagaaggcgacgatttcgttgttctttca
gacatccttggtgatgaagaccacctaggtgacatggactttaaagtagcgggtactagc
gaaggtatcactgcgctacagatggatatcaagatcgaaggtatcactaaagagatcatg
cagattgctcttaaccaagcgcaaggtgcacgtaagcacatcctatcggtaatggatgaa
gcgatttctggtgctcgtgaagatatctctgaattcgctccgcgcattcacaccatgaag
atcagcgcagagaagatcaaagacgttatcggtaaaggtggtgcagttatccgtgctcta
actgaagagacgggtacaacgatcgaaatcgaagacgacggtactatcaagattgcagca
actgaaggtactgcagcgaaagaagcgatccgtcgtatcgaagaaatcactgctgaagtt
gaagtaggtcgcatctacacaggtaaagttgcgcgtttggctgatttcggtgcattcgta
actattcttccaggtaaagatggtctagtacacatctctcaaatcgctgacaagcgtgta
gagaaagtgtctgactacctagctgaaggtcaagaagtacaagttaaagtacttgaaatt
gaccgtcagggccgtgttcgtctgagcatgaaagaagcagtagagaaaactgaagaagca
gcagcggaagaaaagccagcagctgacgcttaa
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