Vibrio sinaloensis: MTO69_03190
Help
Entry
MTO69_03190 CDS
T08230
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vsi
Vibrio sinaloensis
Pathway
vsi03030
DNA replication
vsi03430
Mismatch repair
vsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTO69_03190 (dnaE)
03430 Mismatch repair
MTO69_03190 (dnaE)
03440 Homologous recombination
MTO69_03190 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsi03032
]
MTO69_03190 (dnaE)
03400 DNA repair and recombination proteins [BR:
vsi03400
]
MTO69_03190 (dnaE)
Enzymes [BR:
vsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MTO69_03190 (dnaE)
DNA replication proteins [BR:
vsi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MTO69_03190 (dnaE)
DNA repair and recombination proteins [BR:
vsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MTO69_03190 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UPQ88566
LinkDB
All DBs
Position
1:681512..684991
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDPKFIHLRVHSDFSMVDGLSKVPPLVKKVAELGMPAVALTDFTNLCGLVKFYGTAHSC
GVKPIIGADFVMQSAEFGDELTKLTVLAANNVGYKNLTLLISKAYLRGHIQHQPVIDKEW
LVELSEGVIILSGGKNGEIGRALLKGNQKIVDECVAFYRTHFQDRFYLELTRTGRADEET
YLHFALELAEQADLPVVATNEVVILEESLFDAHEIRVAIHDGYTLEDPRRPKNYSPQQYL
RSEEEMCELFADIPEALQNSVEIAKRCNVTVRLGEYFLPAFPTEGMEETEYLVMKSKEGL
EERLEFLFPDPKVRAERRPEYDERLEVELEVINNMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHGFGFVDRISKLVPPDPGMTLEKAFKAEPA
LVELYENDEEIKELIDMCRILEGCTRNAGKHAGGVVISPTTITDFAPIYADAEGHFPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALGLINPRLEKEGKEPVRIESIPLEDQASFNLL
QNSETTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDETWQHESLKETLEPTYGIILYQEQVMQIAQILAGYTLGGADMLRRAMGKKKPEEM
AKQRAVFKEGAENNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTEKVVGLVDECLRMKLKVLPPDINAGLYRFNVNEEGAIVYGIGAIKG
VGEGPIEAILEARNKGGHFKDLFDFCARLDLKKVNKRVIEKLILAGALDRLGPHRAAMMA
SLNDAVKAASQHHQAEAFGQTDLFGVLTEAPEEVEHKYTKVEPWPEKVWLEGERDTLGLY
LTGHPINAYLKELGKYTSCRLKDATPTRRDQSVTVAGLVIAARVMTTKRGTRIGIMTLDD
RSGRMEVMLFSDALDRYAELLEKDKILVVSGQVSFDDFNGGLKMSAREVMDLGSAREKYA
RGLSVSIEQSQINDRFFERFSQILEPHRAGSVPVHVYYQRSDARARLTLGTEWRVTPSDA
LLDDLKQLLGKGQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcctaagtttatccaccttcgagttcatagtgacttctccatggttgacggc
ctttccaaagtgccgcctttggttaagaaagtggctgaattgggcatgcccgccgttgca
ttgactgactttaccaacttatgtggtttggtgaaattttacggaacggcacatagctgc
ggtgttaagcccatcatcggcgctgactttgtgatgcaatcggccgagtttggtgatgag
ttgaccaagctaaccgtgcttgccgctaacaatgttggctataagaatctgactttgttg
atttccaaagcctaccttcgggggcatatacagcaccagccagtgatcgacaaagagtgg
ttagttgagctgtctgaaggtgtgattattctttccggcggcaagaatggtgaaattggc
cgggcactgctcaaaggaaaccagaagattgtcgatgagtgtgtggcgttttatcgcact
cattttcaagaccgtttttatctcgagcttacccgcaccggtcgtgcggatgaagaaacc
tatctccattttgccttggaactggctgagcaagctgatttacctgtggtcgccaccaat
gaggtggtgatcttagaagagtcgctgtttgatgctcacgaaattcgagtcgcgattcat
gatggctatacactagaagatcctcgccgacctaaaaactacagtcctcagcaatatcta
cgcagtgaagaagagatgtgcgagctgttcgccgacattccggaagcgctacaaaacagt
gtggaaattgctaagcgttgtaacgtcacggtacgcttgggcgaatatttcctgcctgct
ttccctaccgaagggatggaagagaccgagtatttggttatgaaatccaaggaagggtta
gaagagcgcctagagtttcttttccctgatcctaaggtgcgcgcagagcgccgaccagag
tacgatgagcgactagaggtcgagctagaagtgatcaataacatgggattcccaggttat
ttcttgatcgttatggagtttatccagtggtcaaaagataacggcattccggtgggtcca
ggacgtggttctggtgccggttcgctggtggcgtacgcactgaaaatcacagacctcgat
ccgcttgaatacgatttgcttttcgaacgattcctcaacccggaacgtgtttccatgccc
gacttcgatgtcgatttctgtatggataaacgtgaccaggtgatcgatcacgtggcagaa
atgtatggccgcgatgcggtttcgcaaatcatcaccttcggtacgatggcggctaaggcg
gttattcgcgatgtagggcgtgtactaggacatggtttcggctttgtcgaccgtatttcc
aagctggtcccaccggatcctggaatgacgctggaaaaagcgtttaaagccgaacccgct
ttggtcgagctgtatgaaaacgacgaagagatcaaagagctgattgatatgtgtcgcatc
cttgaagggtgtacacgtaatgcgggtaagcacgcgggaggggtggtgatctcgccaacc
accattaccgattttgcgcctatctatgccgatgcagaagggcactttccggtcactcag
tttgataagaacgatgtagaaaccgctgggttggtgaagtttgacttcttaggacttcga
accttaaccatcatagattgggcgttgggattaattaacccgaggcttgaaaaagaaggc
aaagagccggttcgaattgagtcgattccactcgaagatcaagcttctttcaatctacta
caaaactcagaaacgaccgcggtattccagcttgaatcacgcgggatgaaagagctgatt
aagcgcctacaaccagactgttttgaagacattatcgctttggtggcgctattccgcccg
ggaccattgcaatcgggcatggtagataacttcatcgaccgtaagcacggcagagaagcg
atttcatatcctgatgaaacctggcagcatgagtcgcttaaagaaacgcttgaaccgact
tatggcatcatcttgtaccaagagcaggtgatgcagatcgcccagattttggccggttat
accttgggcggcgctgacatgctgcgccgtgctatgggtaagaaaaagccagaagagatg
gccaaacagcgcgctgtgttcaaagagggcgcagaaaacaatggcgtcgatggcgagctg
gcgatgaagatcttcgacttggtggagaagttcgcaggctatggctttaacaaatcgcac
tccgctgcctatgcgctggtttcctaccagacgttgtggctgaaaacgcactatcctgct
gagtttatggctgcggttatgaccgctgatatggataacaccgaaaaggtggttgggctg
gtggacgagtgcctacgcatgaagctcaaagtgctgccgccagacattaacgcgggtctg
tatcgttttaacgtcaatgaagaaggggcaattgtctacggtattggcgcgattaaaggg
gtgggtgaagggcccattgaagcgatactcgaagcgcgcaataagggcggccactttaaa
gatttgttcgatttctgtgcgcgtttagacttgaaaaaggtcaacaaacgggtcattgaa
aaattgattctggctggagcgctggatcgccttgggcctcaccgcgcggcaatgatggct
tcgctgaatgatgcggttaaggctgccagtcaacaccatcaagcagaagcgtttggtcaa
accgatctgtttggcgtgttaactgaagctcctgaagaagtcgaacacaagtacactaag
gtggaaccatggccagagaaagtgtggctagagggagaacgtgacacacttggcctttat
ttaaccggtcacccaataaatgcctacctgaaggaacttggtaagtacaccagttgtcga
ctaaaagacgccacaccgactcgccgcgatcaaagtgtgacggtagcggggttagttatc
gctgctcgagtgatgacgaccaagcgcggcactcgaattggtatcatgactttagacgac
cgtagtggtcgtatggaagtgatgttattctccgatgcgctggatagatacgctgaattg
ctagaaaaagacaaaattttagtggtttcaggacaggtcagctttgatgatttcaatggt
ggtcttaaaatgtcggcgcgcgaggttatggatctcggtagtgcgcgtgaaaagtacgcg
cgtggtttatccgtttccatcgaacaatcgcaaatcaatgaccgattttttgagcgcttt
agtcaaatcctagagcctcatcgggcggggagcgtccctgtccatgtatactaccaacgc
tcagatgcccgagcgagattaacgttaggtacagaatggcgtgtgacgccgagtgacgct
ttattagatgatttaaaacaactgcttgggaaaggccaagtagaactcgaatttaactaa
DBGET
integrated database retrieval system
