KEGG   Vibrio sinaloensis: MTO69_04060
Entry
MTO69_04060       CDS       T08230                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
vsi  Vibrio sinaloensis
Pathway
vsi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vsi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MTO69_04060 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vsi03400]
    MTO69_04060 (uvrB)
DNA repair and recombination proteins [BR:vsi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MTO69_04060 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MTO69_04060 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD AAA_30 UvrD-helicase UB2H
Other DBs
NCBI-ProteinID: UPQ89242
LinkDB
Position
1:839769..841799
AA seq 676 aa
MSKVFDLVSDYQPAGDQPSAIKQLIEGLDAGLAHQTLLGVTGSGKTFTLANVIANAQRPA
ILLAPNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDASVNAHIE
QMRLSATKALLERKDAIIVASVSAIYGLGDPESYLKMMLHIRRGDMIDQRDILRRLAELQ
YSRNDVAFERGQFRVRGEVIDIFPAESDQDAVRIEMFDDEIDCISVFDPLTGVVKQRDLA
RYTIYPKTHYVTPRDRMLEAIEQIKIELESRKKHLLDNNKLLEEQRISQRTQFDIEMMNE
LGFCSGIENYSRYLSGRNEGEPPPTLFDYLPHDGLLIIDESHVTVPQIGAMYKGDRSRKE
TLVEFGFRLPSALDNRPLKFEEFEALAPQTIFVSATPGNYELEKSSGDIADQVVRPTGLL
DPELEVRPVATQVDDLLSEIRIRAAKDERVLVTTLTKRMAEDLTEYLTEHEVKVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNVAGKAILYADNVTKSMRKAMDETNRRREKQQAYNQEMGIEPQALKRNIKDIMEL
GDITKSKKQRASKTVPLSKVAEPSQNYQVMSPQELDKEIRKLEAQMYQHAQDLEFELAAE
KRDQIDQLRQRFIANS
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgagtaaagtattcgatttggtctcggattatcagccagctggtgatcaacctagcgca
ataaagcaattaatcgaagggcttgatgccggactcgcccaccaaactttattgggggta
accgggtcaggtaagactttcactcttgctaatgtgatcgcgaatgctcagcgtccagcg
attttgcttgcaccgaacaaaacactagccgcgcaactgtatggtgaaatgaagtcattt
ttccccaacaatgcggtcgagtattttgtttcttactacgactattaccaaccagaagcc
tacgttccgaccaccgatacctttattgaaaaagacgcgtcagttaacgcacacattgaa
cagatgcgtctttccgctaccaaagcattattggagcgtaaagatgccattattgttgcc
tctgtatcagcgatttatggtttgggtgatcctgagtcctatctaaaaatgatgttgcat
attcgacgtggcgacatgatcgaccagcgtgatatcttgcgccgtttggccgagctgcaa
tatagccgcaatgatgtcgcattcgagcgtggtcagtttcgagtacgtggtgaggtgatt
gacatttttcctgccgagtcggatcaagacgcggtgcgcatcgaaatgtttgatgatgag
atcgattgtataagcgtgtttgacccactaaccggagttgtcaaacagcgcgatctggcc
cgctatacgatttatcctaaaacgcactacgtgaccccacgcgatcgcatgttagaagcg
attgaacagataaagatagagttggagtcgcgcaaaaagcatctgcttgataacaataag
ttgctagaagagcagcgtatttctcagcgaactcagttcgatatcgagatgatgaatgag
ctgggtttctgttcagggattgaaaactactcgcgttacttaagcgggcgaaatgagggt
gagccgccgccaacactatttgattacttgccccatgacggcctgctgattatcgatgag
tctcatgttactgtgccgcagattggtgccatgtataaaggggaccgttcgcgcaaggag
acactggttgagttcggctttcgcctgccatccgctttggataaccgtccattgaaattt
gaagagtttgaggcattagcgccgcaaacgatttttgtctcagcgacgcctggtaactat
gagttggagaaatcatcgggtgatattgcggatcaagtcgtgcgtccaaccgggctgctt
gatcctgagttagaagttcgtccagtggccactcaagtcgatgatttgttgtctgaaatc
cgaattcgtgccgctaaagatgaacgtgtactggtaaccacgctgaccaagcgcatggca
gaagacctcactgagtacctgacggaacatgaggtaaaggtcaggtatctgcactctgac
attgatacggtcgaacgtgtagagatcatccgagacctacgtttgggcgagtttgatgtt
ctggtgggcatcaacttattgcgtgaggggttggatatgccagaagtgtctttggtcgcg
atattggatgccgataaagaaggcttcttacgctcagagcgctcgctgatccagaccatt
ggccgcgcagcgcgaaacgtggcgggcaaggcgattctttatgccgacaatgtcaccaaa
tcgatgcgaaaggcgatggatgaaaccaatcgacgtcgtgaaaagcagcaggcatacaac
caagagatgggaattgagccgcaagcgctgaaacgcaacattaaagatatcatggagctg
ggtgatatcaccaagagtaagaagcagcgagcgagcaaaactgtaccactgtctaaagtg
gctgagccctcgcaaaattatcaagtgatgtcgccacaagagctggataaagagattcgt
aaactggaagctcagatgtatcagcacgcacaagatttagagttcgagttggcggcagag
aagcgcgaccaaatcgatcagctgcggcagcggtttatagccaatagttag

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