Vibrio sinaloensis: MTO69_05100
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Entry
MTO69_05100 CDS
T08230
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
vsi
Vibrio sinaloensis
Pathway
vsi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vsi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MTO69_05100 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsi02000
]
MTO69_05100 (msbA)
Enzymes [BR:
vsi01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
MTO69_05100 (msbA)
Transporters [BR:
vsi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
MTO69_05100 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
RsgA_GTPase
APS_kinase
AAA_24
nSTAND3
DEAD
AAA_29
AAA_25
Zeta_toxin
SLFN-g3_helicase
AAA
AAA_14
MMR_HSR1
AAA_18
DUF87
G-alpha
ATP-synt_ab
TniB
ATPase
CoaE
Motif
Other DBs
NCBI-ProteinID:
UPQ88908
LinkDB
All DBs
Position
1:1074993..1076741
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AA seq
582 aa
AA seq
DB search
MSLNQDETTWQTFKRLWTYIRLYKAGLAVAVVALIINAMADTYMVSLLKPLLDEGFGNTE
SNFLRILPIIIFGMMVVRGLSGFVSTYCLSWVSGNVVMEMRRSIFNQFMHMPVAYFDKES
AGGLLSRITYDSEQVAGATSRALVSIVREGASIVGLLVLMFWNSWELSLVLFVVAPLVAW
GIGVVSKRFRKISKNMQDAMGHVTSSAEQMLKGHKVVLSYGGQRVEKERFDSVSNTMRQQ
SMKLVAAQAIANPVIQLIASIALIVVLFLASVDSIRSELTPGTFTVVFSAMFGLMRPLKA
LTNVTSEFQRGMAASQTLFALMDLETERDSGQYEVEKARGDIEVKEVTFTYAGKEKPALS
DVSFTIPRGKTVALVGRSGSGKSTIANLFTRFYDVDAGTIYLDGHDIRDYKLSNLRSHFA
LVSQNVHLFNDTISNNIAYAATEKYSREQIEQAARLAYAMDFIESMDDGLDTVIGENGAS
LSGGQRQRIAIARALLRDAPVLILDEATSALDTESEKAIQSALDELQKNKTVLVIAHRLS
TIENADEILVVDEGEIVERGNHATLIEKDGAYAQLHRIQFGA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgaatcaagacgaaacaacttggcaaaccttcaaacgcttgtggacctacatt
cgcttgtacaaagcaggtcttgcagttgctgtcgttgcattgatcatcaatgcgatggcc
gatacttacatggtctctctacttaaaccgttacttgatgaagggtttggtaatactgaa
tccaattttttgcggattttaccaattatcatctttggcatgatggtggtgcgcggcttg
agcggttttgtatccacttactgtttgagctgggtgtcgggtaatgtggttatggagatg
cgtcgctcgatctttaatcagtttatgcacatgccggttgcttacttcgacaaagagtcg
gccggtggtctactgtctcgaatcacttatgattctgagcaggtcgccggggcaaccagt
cgcgcgttggtgagcatcgtgcgcgagggcgcgagtattgtcggcttgcttgttctgatg
ttttggaacagctgggagctctcgctagtactgtttgttgtcgcgccgctcgttgcttgg
ggcatcggtgtggtgtcaaaacgtttccgaaaaatctcaaagaatatgcaagacgcgatg
ggacatgtcacctcatcggcggagcagatgcttaaaggccataaagtggtattgagttat
ggtggtcagcgtgtcgagaaggagcgctttgattctgtgagtaacacgatgcgccaacaa
tcaatgaagctggtcgccgcgcaggcaatcgcgaacccagtgattcaattaattgcttca
attgcgttgattgtggtgctgtttctcgccagtgtcgattccattcgttcagagctaacg
cctgggacttttaccgtggtcttttcagctatgtttggcttaatgcgaccactcaaagcg
ctgacgaatgtaacctcagagtttcagcgtggtatggcggccagccaaaccttgttcgct
ttaatggacttagaaactgaacgtgatagtggccagtatgaagtcgaaaaggctcgtggt
gacatcgaagtgaaagaggtgacctttacttacgcaggtaaagagaaacccgcgttgagt
gacgttagctttacgattcctcgaggaaaaacagtcgccttagttgggcgctcaggctcg
ggcaagagtacgatcgccaacttatttacccgtttttatgatgtcgatgctgggacgatt
tatctggatggacacgacatccgtgactacaagttaagcaatcttcgctctcattttgcg
ttggtgtctcaaaatgtgcacctatttaacgatacgatttccaacaatatcgcttatgct
gctactgagaagtacagccgagagcaaatagaacaggctgcgcgcttggcatatgccatg
gactttattgagtcgatggatgatggtttagatactgtgattggtgagaatggcgccagt
ttgtctggtggacaacgtcaacgtattgccatcgcccgggcgttattacgcgatgcgccg
gtgcttattctcgatgaggcgacatccgcgcttgatacagagtctgagaaagcgattcag
tctgcattggatgaactgcagaagaataaaaccgtgctggtgatcgctcaccgtctctct
accattgaaaatgctgatgagatcttggtggttgatgaaggtgaaatcgtagagcgcggc
aaccatgcaacgcttatcgaaaaagatggcgcatatgcgcagttacaccgcatccagttt
ggggcttaa
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