Vibrio sinaloensis: MTO69_08825
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Entry
MTO69_08825 CDS
T08230
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vsi
Vibrio sinaloensis
Brite
KEGG Orthology (KO) [BR:
vsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsi03032
]
MTO69_08825 (topA)
03400 DNA repair and recombination proteins [BR:
vsi03400
]
MTO69_08825 (topA)
Enzymes [BR:
vsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MTO69_08825 (topA)
DNA replication proteins [BR:
vsi03032
]
Prokaryotic type
DNA Topoisomerases
MTO69_08825 (topA)
DNA repair and recombination proteins [BR:
vsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MTO69_08825 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UPQ87133
LinkDB
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Position
1:complement(1950419..1953046)
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AA seq
875 aa
AA seq
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MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTAGQSTGQKAAAVSTKGLSAEE
KARIKKEKDRKALIKKMGIDPYHGWEANYQILPGKEKVVAELQKLAKDADSVYLATDLDR
EGEAIAWHLREIIGGDEQRYKRVVFNEITKNAIQQAFEKPGELSMDGVNAQQARRFLDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFVPEEFWDIHADTKTQDKTDF
RLQVAQKDGVAFKPVSEAETKAAMAVLEKARYEVCKREDRPTSSKPSAPFITSTLQQAAS
TRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSAEAVETVRGFIGDEFGDAYLPAKPNV
YGSKEGAQEAHEAIRPSDVTVKADDLNGMEADAHKLYALIWNQFVACQMTPAKYDSTTVS
VKAAEYTLKAKGRILKFDGWTRVQRPLGKNEDQILPAVQVGDSVDLIKLDPKQHFTKPPA
RFTEAALVKELEKRGIGRPSTYASIISTIQDRGYVKVEQRRFYAEKMGEIVTDRLDGSFD
DLMNYEFTSRMEEKLDQIAEGEANWKAVLDDFFNDFTGDLAKAELDEDEGGMKPNHIVYT
DIECPTCSRPMGIRTASTGVFLGCSGYALPPKERCKTTINLGDEEGIINVLEEDVETAAL
RAKKRCPICETAMDAYLIDDKRKMHVCGNNPNCEGYVVEYGEFKVKGYDGPVVECDKCGS
DMVLKNGRFGKYMDCTSDDCKNTRKILKNGEVAPPKEDPVHLPELPCENSDAYFVLRDGA
SGLFLAASTFPKSRETRAPLVEELVRFKDRISPKFHYLTEAPQQDPDGRPMVVRFSRKTK
ENYVRSEIDGKPSGYTALYVDGKWEITDKRKNAAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagtcactggttattgtggagtcgccagccaaagcgaagaccatcaataagtat
ttaggtaaggacttcattgtaaagtccagtgtaggtcacgttcgtgatctacctactgct
ggccaaagtactggccagaaagcagccgcggtatccactaaaggcttaagcgccgaagaa
aaagcacgcattaaaaaagagaaagatcgcaaagctctgatcaagaaaatgggcatcgac
ccatatcatggttgggaggcgaactatcaaattcttcccggcaaagagaaagttgtcgca
gagctacagaagctggctaaagatgcagacagcgtctatctcgcaaccgatttggaccgc
gagggagaggctatcgcttggcaccttcgtgagatcatcggcggcgatgaacagcgatac
aaacgagtcgtatttaacgagattaccaaaaatgccatccagcaagcgtttgaaaaaccg
ggcgagttgagcatggatggggtgaacgctcagcaggcaagacgctttcttgaccgtgtt
gtgggctttatggtgtcacctctgttatggaaaaaagtggcgcgtggcctttccgctggt
cgtgtccagtcggtggcagtgaagctattggttgaacgcgagcgtgaaatcaaagccttt
gtaccagaagagttttgggatattcacgccgacaccaaaacacaagacaaaaccgacttc
cgattgcaagtcgcccagaaagatggcgttgctttcaaaccggtaagtgaagccgagacc
aaagctgcgatggcggtgttggaaaaagcgcgctacgaagtgtgcaaacgcgaagaccgc
ccaacgtcgagcaagccttctgccccattcattacttccacactgcagcaagcggcgagt
actcgtcttggctatggggttaagaaaaccatgatgttggcccagcgcctgtatgaagcg
ggttacatcacctatatgcgtaccgactcgaccaacttaagtgctgaggccgtggaaacg
gttcgtggctttattggtgacgagtttggcgatgcttacttgcctgctaagccaaatgtc
tatggcagcaaagagggcgcacaagaagcgcacgaagcgattcgtccttctgatgtgacg
gtgaaagcagacgaccttaatggaatggaagcggatgcgcacaaactgtacgcgttgatc
tggaatcagtttgtggcgtgtcagatgacaccagccaaatacgactcaaccacggtcagc
gtaaaggctgccgagtacaccttgaaggccaaaggccgcatcttgaagtttgacggttgg
acgcgtgttcagcgccctctgggtaaaaatgaggaccaaattcttcctgcggttcaggtg
ggtgatagcgttgatctgatcaagcttgatccgaaacaacactttactaagccgccagcg
cgcttcaccgaagccgcgttagtgaaagagctggaaaaacgaggtattggccgtccttcg
acttacgcttctatcatctcgaccattcaagaccgaggttacgtcaaagtcgaacagcgt
cgtttctatgccgagaaaatgggtgagatcgttaccgatcgcctagatggcagcttcgat
gacttgatgaactacgagttcacctcgcgcatggaagagaagcttgaccagattgcggaa
ggagaagccaactggaaggccgtgttggatgatttcttcaacgacttcactggcgacttg
gcaaaagcggaacttgatgaagatgagggcggcatgaagccaaaccacatcgtttacacc
gacattgagtgtccgacgtgttcaagacctatgggtattcgtactgcctctaccggcgtt
ttcctaggttgttcgggttatgcgctgccaccaaaagagcgttgtaaaaccaccatcaac
ttgggtgatgaagagggtatcatcaacgtccttgaagaagacgttgaaaccgcagctctg
cgcgctaagaaacgttgtccgatttgtgaaaccgcaatggatgcgtacttgatcgacgat
aaacgtaaaatgcatgtttgtggtaataaccctaactgtgaaggctatgttgtcgagtac
ggtgagttcaaagtcaaaggctatgatggtcctgttgtcgaatgtgataaatgtggcagc
gacatggtgctcaagaatggccgttttggtaagtacatggattgcactagcgatgattgt
aagaacacgcgtaagatactaaaaaatggtgaagtggcgccgccgaaagaggatccagtt
cacttgccagagctgccatgtgaaaactctgatgcttacttcgtacttcgcgatggtgcc
tctgggctgttcttagccgcgagcacattcccgaaatcacgcgaaactcgagcgcctttg
gttgaggaattggtccgtttcaaagaccgtatctcgccaaaattccattatttgaccgag
gcgccgcagcaagatcctgatggtcgtcctatggtggtgcgttttagccgtaaaaccaaa
gagaactatgttcgttctgaaatcgacggcaaaccatcgggttacactgcgctctacgtt
gatggtaagtgggaaatcactgacaagcgtaagaatgccgccaagtaa
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