Vibrio sinaloensis: MTO69_10315
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Entry
MTO69_10315 CDS
T08230
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vsi
Vibrio sinaloensis
Pathway
vsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MTO69_10315 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsi03400
]
MTO69_10315 (recC)
Enzymes [BR:
vsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MTO69_10315 (recC)
DNA repair and recombination proteins [BR:
vsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MTO69_10315 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UPQ87413
LinkDB
All DBs
Position
1:complement(2277556..2281035)
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AA seq
1159 aa
AA seq
DB search
MFTVYHSNQVDVLKSLLVELIRLNPLENPFEAEQILVQSPGMSQWLKMELAKEFGVAANI
EFPLPATFIWNMFTEVLTEVPERSAFNKESMTWKLMQILPALLERDEFAPLKRYLADDND
QSKLYQLSEKIADIFDGYLVYRPEWIASWEAGQPVAELQDEHPWQPILWQALYDHTLALG
QSPYHRANLYQHFIETLENYAATAQSEGFQHLPKRLFVFGITSLPPRYMDALKAIGEHID
VHLMFTNPCRYYWGEVRDRKFLARLAARHRQHLVWNQDHSELDGQSQQLKGSLEENVVDE
LHTDVVGNSLLASMGKLGRDNMYLLSQLDSHEIEAFVDIERDSLLHQLQADILNLEEHQD
DSLLDSSAHKQLVDPGDRSLSLHVCHSPMREVEVLHDQLLAMFDADPSLKPRDIIVMVAD
INAYSPAIQAVFGNAPGERFIPYSISDRTADQESPILHAFMQLVDLPNTRCLASELLELL
ETPAILARFAISAEEFVLAKQWVEESGVRWGLNGDTCREFDLPENSHNTWQFGIERMLLG
YAMPDTAGLFTTSHGQLAPYNQVQGLGADLAGKLAQFIQAISDYRQRLGETQSIDAWREV
LTQLLDDFFLVELEGEAALKSIRDTLANLKQQLNDAAFEQSLAPAIVRQYLLDKLSGTRV
SQRFLAGQVNFCTLMPMRSIPFRTVCLLGMNDGVYPRSMPPEGFDLMTGRTRPGDRSRRD
DDRYLFLEALLSAQQTLYISYVGRSIQDNTERVPSVLVSELVEYCQQNYCLLGEQDKPSD
ESGDALVASLVTHHPMVPFSEQAFSGEHPSYAKEWLPAANRQGQQSGAFNRQLDDYLLDA
TFPLELDLVELQRFWRLPVQYFFNRRLKVTFEPPLPVMQDEEPFVLGGLESYQMRDALLN
ELLKQQQLGQQLQQVMEAFVEQQRAQGKLPVGAFGEIEFETNRVQAEQLLEKIGFVCQAS
LDDIEIKLTLTPFGADKPVLLTGWLTQVFQSGLVRFRSGQLRAQDYLAAWIDHLAMSAMG
VSRPTHMIGYDRKEGAIHLIYPAIADRKQAVEWLTELVRLFYQGMTQPLAYFPKTALANI
EAGFSRGHWADDEEKALKKMADTFNDGYLSPGEGNNVYIARIWPSWDQTLAEQVRHLSHL
VIQTPRLMMQTSEEASQSL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
gtgtttactgtttaccattccaaccaagtcgatgtattgaaatccctactggttgagttg
attcggctcaatccgctggagaacccgtttgaagcggagcaaattttagtacaaagcccg
ggtatgtcccagtggcttaaaatggaattggcgaaagagtttggcgtggcggccaatatt
gaattcccgctgccagcgaccttcatctggaatatgtttaccgaggtattgaccgaggtg
cccgaacgcagtgcattcaacaaagagtcgatgacctggaagttgatgcaaatcttgccc
gcgttactcgagcgtgatgaatttgccccactgaaacgttatctcgctgatgataacgac
cagtctaagctctaccagttatcagaaaaaatcgccgatatcttcgatggctatttggtg
tatcgaccagagtggatcgcaagctgggaagcagggcaaccggtggccgagttacaagac
gaacatccatggcagcctatcctgtggcaagcgctgtacgaccatactttagcgctcggc
caatcgccctatcatcgtgccaatctgtaccagcactttattgagacgctggaaaattac
gccgccacagcgcaaagcgaaggctttcagcacttgccaaaacgtttgtttgtatttggt
attacctcattgcctccacgctatatggatgcattaaaagcgattggtgagcacatcgat
gtccatttgatgtttaccaacccttgtcgttattactggggcgaagtgcgggatagaaaa
ttcctggcgcgtttggctgctaggcatcgtcagcacttggtgtggaatcaagaccactcg
gagctagatggtcagagccagcagctaaagggcagcttggaagagaatgtggtcgatgaa
ctgcataccgatgtcgttggtaacagcttgcttgcgtctatgggcaaactcggtcgagat
aacatgtatttgctatcgcaactggatagccacgaaattgaagccttcgtggatattgag
cgtgactccttgctgcatcagttgcaggccgacattctcaatctagaagagcatcaagat
gacagcctactcgacagcagtgcgcacaagcaactggtagatccgggagacaggtcactc
agcttgcatgtgtgtcacagtccgatgcgcgaagtggaggtgctgcatgatcagttgctg
gcgatgtttgatgcagacccgagcctaaaaccgcgcgatatcatagtgatggtggcggac
atcaacgcctatagcccggcgattcaggcggtatttggcaatgctccgggtgagcgtttt
attccgtattccatttctgatcgcaccgccgatcaagagagcccaatcctgcatgccttt
atgcagttggtcgatttgcctaacactcgctgtctggcttcagagctactcgagttgcta
gaaacgccggcgatattggcccgctttgcgatcagcgcagaggagtttgtgctcgccaag
cagtgggtcgaagagtctggggttcgctgggggctcaatggtgatacctgccgcgagttt
gacctgcctgagaacagtcataatacctggcaatttggcatcgaacgcatgttgctgggt
tacgccatgccagacacggcgggtctgtttaccacttcacatggtcaactggcaccatac
aatcaagtacaagggctgggagccgatcttgctggtaaactagcgcagtttattcaagcg
ataagcgattatcgtcagcgtctcggcgaaacccaaagcattgatgcgtggcgcgaagta
ttaacccaattgctcgatgactttttcttggtcgagctagagggcgaggcggcattaaag
tcgatccgcgataccttggccaatctcaagcagcagttgaacgatgccgcgtttgagcag
tcgcttgctcccgccattgtgcgccagtacttgctcgacaagctgtctggaacccgagtg
agtcaacgctttcttgccgggcaagtgaacttctgtaccctaatgccgatgcgctcgatt
ccgtttcgaactgtgtgcctgctggggatgaacgatggcgtctatcctcgctctatgccg
ccagagggattcgatttgatgactggtcgtactcgaccgggggatcgctcgcgtcgagat
gacgaccgttacctttttctggaagcgctgttatctgcgcagcagacgctctatatcagt
tatgtaggccgctcgattcaagacaataccgaacgggtaccatcagtgttggtgtctgag
ttggtcgaatactgtcagcaaaactattgtttactcggagagcaagacaagccgtcagat
gagtcgggcgatgcgctggtcgcaagtctggtgacgcaccatcccatggtaccgttcagt
gagcaagcctttagcggcgagcacccaagttatgccaaagagtggctacctgcggccaat
cgtcaggggcaacagagtggtgctttcaaccgtcagctggatgactatctattagacgca
actttcccgctcgagctcgatttggttgaattgcaacgcttttggcgcctgcccgtgcaa
tatttctttaatcgccgcctcaaagtgacgtttgagccgccactgcctgtgatgcaggat
gaagagccttttgtgctgggcggtctggagagctatcagatgcgtgatgcactgctcaat
gaactacttaaacagcagcagctagggcaacaactacaacaggtgatggaagcgtttgtt
gagcagcaacgtgcgcagggaaaattgccggtcggcgcatttggcgaaattgagtttgag
actaatcgtgtacaagccgaacagctgctggaaaagattggctttgtatgtcaagccagc
ctagatgatatcgaaatcaagctcacgcttacgccgtttggcgcagacaagccggtgcta
ctgaccggttggttaacccaagtattccaatccggtttggtccgttttcgcagcggtcaa
ttgcgcgcccaagactatctcgccgcttggattgatcatctcgcaatgtcggcaatgggc
gtcagtcgcccgacccatatgattggctacgatcgcaaagagggcgcgatacacttgatc
tatcctgccatcgccgaccgcaaacaggcggttgaatggttgaccgagctggttcgcttg
ttctatcaaggtatgacacagccgttggcttattttcctaaaaccgcgctggctaatatc
gaagcgggctttagccgtggccattgggctgacgatgaagagaaggcgctgaagaaaatg
gccgatacctttaacgatggctatctgtcaccgggagaagggaacaacgtttatattgcc
cgtatttggccaagttgggatcagacattggcggagcaagtgcgtcacttaagtcactta
gtgattcagacaccaagactgatgatgcaaaccagtgaagaggcgagtcagtcgttatga
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