Vibrio sinaloensis: MTO69_11345
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Entry
MTO69_11345 CDS
T08230
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vsi
Vibrio sinaloensis
Pathway
vsi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vsi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTO69_11345 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vsi03019
]
MTO69_11345 (pcnB)
Enzymes [BR:
vsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MTO69_11345 (pcnB)
Messenger RNA biogenesis [BR:
vsi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MTO69_11345 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
UPQ87602
LinkDB
All DBs
Position
1:2525418..2526785
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AA seq
455 aa
AA seq
DB search
MHMNKIDDTASEATVFSELALNIITRQEHNISRKQISDNALKVLYRLHGAGFDAYLVGGG
VRDLLLGQQPKDFDIATNATPEQIRQLFKNCRLIGRRFRLAHIMFGRDIIEVATFRGHHQ
EPSKNVAQQSKEGMLLRDNVYGTIDEDAERRDFTVNAMYYNIGDYSIHDYARGIEDLEDK
LIRLIGDPATRYREDPVRMLRAIRFAVKLDFDIEEDTAAPIEELATLLQDIPAARLYEES
LKMLQSGHGLETYHLMREYNLFQQLFPTIAEYFTDDYSSPTEQMLDLVLDSTDQRIEEGK
RINPAFMFAAMLWYPLQERAQLLMEKRKLSYYDAIMEASNYVLDEQVRTIAIPRRHTATI
REIWQLQLRLPRRSGKRAFRLMELNKFRAGFDFLEMRGEIEQGDTQLLAKWWQTFQNAGR
NMRQAMVADLDASSEGQPRQRRRKSSRKKKPKASS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcacatgaacaaaatcgacgatacagcaagcgaggcgaccgtgttttccgaactcgct
ttaaatattattactcgccaagagcataacatctcgcgcaaacagatcagtgataatgca
ttgaaggtgctataccgtcttcatggtgcaggctttgatgcctatcttgttgggggtgga
gtgcgcgacctgctcctcggccagcagccaaaagatttcgatatcgcgaccaatgctacc
ccggaacagattcgccagttgtttaaaaactgccgattgattgggcgccgattccgcctt
gcgcacattatgtttggccgcgacattatcgaagtagctacgttccgcggacaccatcaa
gagccgagtaaaaacgtcgcgcaacagtcgaaagaaggcatgttattgcgtgacaatgtc
tatggcaccatagatgaagacgccgaacgccgcgactttaccgtcaacgccatgtattac
aatatcggcgactactctatccacgactacgctcgtggtatcgaagatttagaagacaag
cttatccgcttaattggcgatccagcgacgcgttatcgtgaagacccagtgcgcatgcta
cgcgcgatccgttttgcggtgaaactggatttcgatatcgaagaagacacagctgcgccg
atcgaagagctggcaaccttgctgcaagatatccctgccgcgcgcttgtatgaagagtcg
ctcaaaatgctccaatccgggcatgggctcgagacctatcatcttatgcgtgagtacaac
ttgttccagcagttattcccaaccatcgcggaatactttactgacgactactcttcgcct
actgaacagatgttagatttggtcctcgactcgactgatcagcgcatcgaagagggcaaa
cgcatcaacccagcctttatgttcgccgcgatgttgtggtatccactgcaagagcgcgct
caattattgatggaaaagcgtaaactctcttattacgacgccattatggaagcgagcaac
tacgtacttgatgagcaagtgcgcaccatcgctatcccgcgccgccataccgcgactatt
cgtgaaatttggcagctgcaattgcgtctgccacgccgcagcggtaaacgcgctttccgc
ctaatggagctcaacaagttccgtgcagggttcgatttcttagaaatgcgtggagagatt
gaacaaggcgatacgcaactgctagcgaaatggtggcaaacgttccaaaatgccggacgc
aatatgcgccaggcgatggtggccgatctcgatgccagcagtgaaggtcagccaagacag
cgccgccgcaagagcagtcgtaagaaaaagccaaaggcgtcatcatga
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