Vibrio sinaloensis: MTO69_11420
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Entry
MTO69_11420 CDS
T08230
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
vsi
Vibrio sinaloensis
Pathway
vsi03410
Base excision repair
vsi03430
Mismatch repair
vsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MTO69_11420 (recJ)
03430 Mismatch repair
MTO69_11420 (recJ)
03440 Homologous recombination
MTO69_11420 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsi03400
]
MTO69_11420 (recJ)
DNA repair and recombination proteins [BR:
vsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MTO69_11420 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MTO69_11420 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MTO69_11420 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
fvmYukDl_N
Motif
Other DBs
NCBI-ProteinID:
UPQ87615
LinkDB
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Position
1:complement(2542919..2544655)
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AA seq
578 aa
AA seq
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MIEIQRRPEVDLSLLPDSIAPLLKRIYIARGITQVEQLETTARALHSYQKLHGIDAAVEL
LFTAIQTQQRIIVVGDFDADGATSSALSVLALRMLGSTNVDYLVPNRFEDGYGLSPEVVD
QAIELGAQVIMTVDNGVSSIEGVRYAKQQGLTVLVTDHHLPGHELPPVDAMVNPNLQQCA
FPSKALAGVGVAFYLMMALCVHMRKSGWFAQQGMAEPKLMELIDLVALGTVADVVPLDEN
NRILVHQGLQRIRAGKARPGIQALIEVAKRDARRLVASDFGFALGPRINAAGRLDDMSFG
VELLLSNNIHAARRMASELDGLNQTRKEIEEGMKQEAMAFCERLQFGDKDMPHGLVLFQR
DWHQGVIGILASRVKEKFHRPVIAFADGGDGAIKGSCRSIPGLHMRDVLDRIDTQNPGLI
IKFGGHAMAAGLTIMEQNFERFAQLFDQAVKQELDEAALKGVLLSDGELKPEEFSMHTAE
MLRAGGPWGQAFPEPLFDGEFKVLHQKLVGEKHLKLMLEPLYKGHPTNIMIDGIAFNVDL
RRWPDASVKTVRLAYKLDINEFRGNQSLQLMIDHLEAK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattcaacgtagacccgaagtcgacttaagccttcttccagactccatagcg
ccgttactcaagcgcatttacatcgcccgtggaattacccaagttgaacagcttgaaacc
acggcaagggcgctgcactcctatcaaaaactgcatggcatcgacgctgccgttgagctg
ctgtttaccgcaattcaaactcagcagcgtattattgtggtcggagactttgatgccgat
ggcgcaacaagctcggcgttgtcggtattggcgctgcgcatgctcggttcaaccaatgtt
gattacttagtaccgaatcggtttgaagatggctatggattaagcccagaagtggtcgac
caagcgatcgaactgggtgcccaagtgatcatgacagtggacaacggcgtctcgtctatc
gaaggggtacgttatgccaagcagcaagggttaactgtgttggtcaccgaccatcaccta
ccaggccacgaactaccgccagtggatgccatggtcaacccgaacttacaacagtgcgct
ttcccttctaaagcactggcaggcgttggggtcgcgttttatttgatgatggcgctgtgc
gtgcatatgcgaaagtctgggtggtttgctcagcaaggcatggctgaacctaagttaatg
gagctgattgatttggtggcgctggggacggttgccgatgtggtgcctttggatgaaaac
aatcggattttggttcatcaagggttgcagcgtattcgggcgggaaaagcacgaccgggc
attcaggcactgatcgaagtggctaagcgtgatgcgcgtcgcttggtggcttcagacttt
ggttttgctcttgggccacgtatcaatgcggcgggccgcttggacgatatgtcgttcggg
gttgaattgctgctgagtaacaatattcatgctgcgcggagaatggccagcgagttagat
ggcttaaaccagacccgcaaagaaattgaagagggcatgaaacaagaagccatggctttt
tgtgagcggctacaatttggcgacaaagatatgcctcatggcttggtgttgttccagcga
gactggcaccaaggggtgattgggattcttgcatccagagtcaaagagaagtttcaccgt
cctgtgattgcttttgctgatggtggcgatggcgcgattaaaggctcatgtcgttctatt
ccaggcttgcacatgcgtgatgtgctggatcgaatagatacccagaatccaggcttgatc
atcaagtttggtggtcatgcgatggccgcaggtttaaccataatggagcaaaactttgag
cgctttgcccagctgtttgatcaagcggtaaaacaggaactcgacgaggctgcattgaaa
ggcgtactgctctctgatggtgagctgaaaccggaagagttttcaatgcatactgcagaa
atgcttcgtgctggtggtccttggggacaagcgtttccagagccgctgtttgatggtgaa
ttcaaagtgttgcaccaaaagttggtgggagaaaaacatctaaagctgatgcttgaacca
ctctacaaaggccatccaaccaatattatgatcgacggtattgcgttcaatgtagacttg
cgacgttggcctgatgcgtcggtcaaaaccgttcgtttagcctacaagcttgatatcaac
gagtttcgcggcaatcagtcattgcagctgatgatcgatcatcttgaagcgaagtag
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