Vibrio sinaloensis: MTO69_11540
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Entry
MTO69_11540 CDS
T08230
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vsi
Vibrio sinaloensis
Brite
KEGG Orthology (KO) [BR:
vsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsi03016
]
MTO69_11540 (truD)
Enzymes [BR:
vsi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MTO69_11540 (truD)
Transfer RNA biogenesis [BR:
vsi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MTO69_11540 (truD)
Prokaryotic type
MTO69_11540 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UPQ89300
LinkDB
All DBs
Position
1:complement(2564809..2565855)
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AA seq
348 aa
AA seq
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MSDILSSLAYLHGKPTAKGKLKAKPEHFQVNENLGFEFSGQGEHLMLRIRKTGENTSFVA
NELAKACGVKSKDVSWAGLKDRHAVTEQWLSVHLPKGDRPDLTQFLAQYPSIEIIATDRH
NKKLRPGDLIGNQFAITVSEVTDMEDVVKRLEAIQRVGVPNYFGSQRFGNQGNNLTEARR
WGRDNVRTRNQNKRSLYLSAARSWIFNTIVSARIEQGLFERAIVGDLVRQQDELVAVEAS
TIEQINEHLAQHQCQLTAALAGDNALPTTDQALALEQPHLDAEPDLMALIRGNRMRHDRR
EVALMPQQLAWQIEGNNITLQFALEAGSFATAIIRELVEEIEVERHYG
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatattttatcttccctcgcttacttgcatggcaaaccgacggccaagggcaaa
cttaaagcgaaacctgaacactttcaggtgaacgaaaacttaggttttgagttttctggt
caaggcgaacacttgatgctgcgtattcgtaaaaccggtgaaaacaccagttttgtggcc
aacgagttagccaaagcatgtggtgtgaagtcgaaagacgtcagttgggctggccttaag
gatcgccatgccgtgactgagcaatggctcagcgtccatctaccgaaaggcgatagaccc
gatttgactcagtttttggcgcaataccctagtattgaaatcatcgccacagaccgacac
aacaaaaaattacgtccgggcgatttgattggaaaccaatttgccatcaccgtgtcagag
gtgacggacatggaagatgtggtcaagcggttagaggcgatacagcgagtcggtgtaccc
aactattttggcagccagcgttttggtaaccaaggcaataacttaactgaagcgcgccgt
tggggacgcgataacgtacgcactcgcaatcagaacaagcgcagcctctacttgtcggcc
gctcgatcatggattttcaataccatagtgtctgcccgtattgagcaaggtctgtttgaa
cgtgcgattgtcggagatttagttcgtcaacaagatgagttagtggcggtagaggcgagt
actatcgagcaaatcaatgaacatcttgcacaacatcagtgtcagttgacggctgcgtta
gccggtgacaacgcattgccaaccaccgatcaggctttggcgctggagcagccgcattta
gatgctgagccagatttgatggcattgattcgcggtaatcgcatgcgtcatgaccgccgc
gaggtggccttgatgcctcagcaactcgcttggcaaatcgaggggaacaatatcacttta
cagtttgcgcttgaggctggcagttttgctaccgcaattattcgtgaactggttgaagaa
attgaagtggagcgtcactacggatga
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