Vibrio sinaloensis: MTO69_12930
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Entry
MTO69_12930 CDS
T08230
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vsi
Vibrio sinaloensis
Pathway
vsi00300
Lysine biosynthesis
vsi00470
D-Amino acid metabolism
vsi01100
Metabolic pathways
vsi01110
Biosynthesis of secondary metabolites
vsi01120
Microbial metabolism in diverse environments
vsi01230
Biosynthesis of amino acids
Module
vsi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vsi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MTO69_12930 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MTO69_12930 (dapF)
Enzymes [BR:
vsi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
MTO69_12930 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UPQ87879
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Position
1:complement(2828536..2829366)
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AA seq
276 aa
AA seq
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MHFHFSKMHGLGNDFMVVDCITQNIFFSPDLIRRLADRHTGVGFDQLLVVEAPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVRMKGLTNKYSISVSTKKGKMVLNIEEDDQVTVNM
GVPEFEPSKIPFKAKQTEKTYILRTEEHTLFCGAVSMGNPHVVTVVDDVTTADVETLGPL
LESHERFPERVNAGFMQVVNRNEVNLRVYERGAGETQACGSGACGAVAVGIVQGVLDDNV
TVRLPGGTLNIRWQGPGKPLYMTGPATHVFDGQLSC
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcatttccatttttctaaaatgcacggtttgggtaatgacttcatggtcgtcgactgc
attacgcaaaacattttcttttcccctgatttgatccgtcgcttggcggatcgtcacact
ggcgtaggttttgaccaactgctggtggttgaagcaccgtatgacccggaaaccgacttc
cactatcgaatttttaatgccgatggcagcgaagtggaacagtgtggtaatggtgcgcgt
tgttttgcccggtttgtgcgtatgaagggcttaaccaataagtacagcatcagtgttagc
actaaaaagggtaaaatggtgctcaacattgaagaagatgatcaggtgacggtcaacatg
ggcgtccctgagtttgagccaagtaagatcccgtttaaagccaaacaaactgaaaaaacc
tacattctccgcactgaagagcacacgctattttgtggcgcggtcagcatgggtaaccca
catgtggtgaccgtggtggatgacgtcaccaccgcagacgtggaaacattaggtccgtta
ctcgaatcacatgaacgattcccagagcgagtcaatgcgggctttatgcaggtcgtcaat
cgcaatgaagtgaatctgcgcgtgtatgagcgcggtgcaggtgaaacccaagcctgtggt
agcggtgcctgtggcgcggttgcggtcggtattgtgcaaggggtgcttgatgataacgtc
accgtgcgcctgccaggcgggacgctcaacattcgttggcaagggccaggcaagccgctt
tacatgacaggaccggcaacccatgtgtttgacggtcaacttagctgctaa
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