Vibrio sinaloensis: MTO69_13055
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Entry
MTO69_13055 CDS
T08230
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
vsi
Vibrio sinaloensis
Pathway
vsi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vsi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTO69_13055 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vsi03021
]
MTO69_13055 (rho)
03019 Messenger RNA biogenesis [BR:
vsi03019
]
MTO69_13055 (rho)
Transcription machinery [BR:
vsi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MTO69_13055 (rho)
Messenger RNA biogenesis [BR:
vsi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MTO69_13055 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA_22
OB_RNB
AAA
S1CSD-TOTE-2
FtsK_SpoIIIE
TP_0747_N
Motif
Other DBs
NCBI-ProteinID:
UPQ89307
UniProt:
A0ACG9V395
LinkDB
All DBs
Position
1:complement(2854430..2855689)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNRPVSDLVKLGESLGLENLARLRKQDIIFAILKAHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDSIAGKIRPPKDGERYFALLKVNTVN
DDKPDNARNKILFENLTPLHANERMVMERGNGSTEDITARVLDLASPIGKGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPECELMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDF
NRSGTRREELLTKNDELQKMWILRKIVHPMGEIDAMEFLIDKLAMTKTNDEFFDAMRRQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaacagaactgaagaacagacctgtgtctgatcttgtcaaacttggcgaaagc
ttgggccttgagaacctagcacgtctgagaaagcaagacatcatcttcgccatccttaaa
gcgcacgcgaaaagtggtgaagatatttttggcgacggggttctggaaatacttcaagac
ggctttggtttcttacgtagtgcggacagctcatatttggcgggtcctgatgatatttac
gtttctccaagtcaaattcgtcgctttaacttgcgcacaggtgactcgattgccggtaag
attcgtccgccaaaagatggtgagcgatactttgcactattaaaagtcaacacggttaac
gatgacaaaccagacaacgcgcgtaacaagattctatttgaaaacttgacgccactgcac
gctaacgagcgtatggtgatggagcgtggtaatggttcgacagaagatattactgctcgt
gttctcgacctcgcgtcgccaattggtaaaggtcagcgtggtctgattgttgctccgcca
aaagcgggtaaaaccatgctgctgcaaaacattgcacagagcattgcttacaaccaccca
gagtgtgagctaatggttcttcttatcgacgagcgtccagaagaagtcaccgagatgcaa
cgcctagtcaaaggtgaagtgattgcctctaccttcgatgaaccagcatctcgtcacgta
caagttgccgaaatggtaatcgaaaaagcgaaacgtcttgttgagcacaagaaagacgtg
gttatcttgcttgactctatcactcgtctagcgcgcgcctacaacacagtcgtaccgtca
tctggtaaagtgttgaccggtggtgtggatgctaacgcactgcatcgtcctaagcgtttc
tttggtgcagcacgtaacgtcgaagagggtggtagcttgacgatcatcgctactgcgcta
gtggatactggctctaagatggacgaagtgatctacgaagagttcaagggtacaggtaac
atggaactgcatctgaaccgtaagattgccgagaagcgtgtcttccctgcgattgacttc
aaccgcagtggtactcgccgcgaagagttgctcaccaaaaatgatgagctacagaagatg
tggatattgcgtaagatcgttcatccaatgggtgaaatcgatgcaatggaattcctcatt
gataagttggccatgaccaagactaacgatgaattcttcgatgcgatgcgtcgccagtaa
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