Vibrio sinaloensis: MTO69_13065
Help
Entry
MTO69_13065 CDS
T08230
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
vsi
Vibrio sinaloensis
Pathway
vsi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vsi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTO69_13065 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vsi03019
]
MTO69_13065 (rhlB)
Enzymes [BR:
vsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MTO69_13065 (rhlB)
Messenger RNA biogenesis [BR:
vsi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MTO69_13065 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
SNF2-rel_dom
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
UPQ87893
LinkDB
All DBs
Position
1:2856328..2857632
Genome browser
AA seq
434 aa
AA seq
DB search
MKKTHITEQKFADLGLAPQITEGLEKKGFEFCTPIQALALPVLLTGQDIAGQAQTGTGKT
LAFLTATFNHLLTTSEHEGRKPNQPRAIIMAPTRELAIQIYNDAEPLIASTGIKAALAYG
GESYDKQLAKLEEGVDVLIGTTGRIIDFYKQKVFNLNHIQAVVLDEADRMFDLGFIKDIR
FLFRRMPEPKERLNMLFSATLSYRVQELAFEHMHNPEHVVVEPEVKTGHRIQEELFYPSN
EHKMALLQTLIEEEWPERAIIFANTKHKCESIWGHLAADGHRVGLLTGDVPQKKRERILE
QFTKGEVDLLVATDVAARGLHIPQVTHVFNFDLPDDCEDYVHRIGRTGRAGASGHSISFA
CEDYAINLPPIEEYIEHTIPVSDYDPSALIQDLPAPIRMRSNRPQQQRRTNTGGSRSGQR
RPNNRSRQRQQKDS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacgcatatcacagagcaaaagttcgccgatttgggattagcccctcaaatc
actgaaggtttggagaaaaaagggttcgaattttgtaccccaatccaagctttggcgttg
ccggtactgctcaccggccaagacattgcaggccaggcccaaacgggcacaggcaaaacc
cttgccttcctgactgctacctttaaccacttattgactacttcggagcatgaaggtcgt
aagccaaaccagccacgcgcgattattatggcgccaactcgcgaactcgcgattcagatc
tataacgatgctgaaccgctgattgcgagtactggtatcaaagcggcacttgcctacggc
ggtgaaagctacgataaacagcttgctaagctcgaagaaggcgtggatgtccttattggc
accactggccgtattatcgatttctacaagcaaaaggtctttaacctaaaccatattcaa
gctgtggtactggatgaagccgaccgcatgtttgatcttggatttatcaaggacatccgc
ttcttgttccgccgcatgcctgaaccgaaagagcgtttgaacatgctgttctctgccacg
ctgtcttaccgcgttcaagaattagcatttgagcacatgcacaacccagagcatgttgtg
gttgagccagaagtgaaaaccggtcaccgcatccaagaagagctgttctacccatcgaac
gaacataaaatggcgctactgcaaactttgatcgaagaagagtggccagagcgcgcgatc
attttcgccaacactaagcacaagtgtgagtctatttggggccacttggcggcagatggt
catcgtgtcggtctgcttactggtgacgttccacagaagaaacgtgaacgtattctcgag
cagtttactaagggtgaagttgacttattggttgcgactgacgtggcagcacgtggttta
cacatcccacaagttacgcacgtgtttaactttgatttacctgacgattgcgaagactac
gtacaccgcatcggtcgtaccggacgcgcaggagcgagcggccattctatcagctttgcc
tgtgaagattacgcgattaaccttccaccaattgaagagtacattgagcacaccattcca
gtgtcagactacgacccaagcgcgctgatccaagatctgccagccccaattcgtatgcgc
tcaaatcgtccacagcagcaacgtcgtaccaacacgggcggatcccgttcaggtcaacgt
cgcccaaacaaccgctcacgtcagcgccaacaaaaggattcttaa
DBGET
integrated database retrieval system
