Vibrio sinaloensis: MTO69_13105
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Entry
MTO69_13105 CDS
T08230
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vsi
Vibrio sinaloensis
Pathway
vsi03420
Nucleotide excision repair
vsi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MTO69_13105 (uvrD)
03430 Mismatch repair
MTO69_13105 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsi03400
]
MTO69_13105 (uvrD)
Enzymes [BR:
vsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTO69_13105 (uvrD)
DNA repair and recombination proteins [BR:
vsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MTO69_13105 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
MTO69_13105 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
SseB_C
Motif
Other DBs
NCBI-ProteinID:
UPQ87901
LinkDB
All DBs
Position
1:complement(2865743..2867914)
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AA seq
723 aa
AA seq
DB search
MDPSLLLDGLNDKQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLMSVEQASPFSIMSV
TFTNKAAAEMRGRIEELMMGSASGMWNGTFHGICHRILRAHYLDAKLPEDFQIIDSDDQQ
RLLRRLIKAQNLDEKQWPPRQVAWWINGKKDEGLRPKHIDAYHDPVTKTYLQLYSAYQEA
CDRAGLVDFAEILLRAHELLREKQHIREHYQARFKHILVDEFQDTNNIQYAWLRMMAGPD
SHVMIVGDDDQSIYGWRGAKIENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANN
TERMGKELWTDGAEGEPISVYSAYNELDEARFAVNKVKEWQDKGGALNDAAMLYRNNAQS
RVLEEALIQAGLPYRIYGGMRFFERQEIKDALSYLRLMSNRNDDAAFERVVNTPTRGLGD
KTLETIRFAARDRGCTLWQASTALLEEQVLPGRAAGALSRFVELIQALEDDTFEMSLHEQ
TDHVIKYSGLFAMYEQEKGEKSKARIENLEELVTATRQFEKPEEAEEMTLLTAFLTHAAL
EAGEGQADEFEDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCY
VGMTRAMEKLYITYAEMRRLYGQDKYHKPSRFIRELPETCLDEVRMKAQVSRPASSGRFS
QTVVKESFNETGFSLGARVMHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYAKL
EKL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatccttcattactcctcgatggtttgaacgacaaacagcgtgaagctgtcgccgcc
ccacttgaaaacctgctcgtgttggcgggcgcaggcagtggtaaaacacgtgtgctggtt
caccgtatcgcgtggttaatgtcggtcgaacaagcgtcgccgttttcgattatgtcggtg
acctttaccaataaagccgcggcggaaatgcgcgggcgtattgaagagttgatgatgggc
agcgcatcgggaatgtggaacgggactttccatggcatttgtcatcggattttgcgtgca
cattacctagatgccaagctaccggaagatttccagattattgatagcgacgatcagcag
cgtttactgcgacgtctcatcaaagcgcaaaacctcgacgaaaaacagtggcctccgcgt
caggtcgcttggtggatcaatggtaagaaagatgaaggtttacgcccgaaacatatcgat
gcctaccacgatccggtgaccaaaacttatctccagctttatagcgcttaccaagaagcg
tgcgatcgcgccggcttggtcgattttgccgagatcttgctccgagcgcatgagctgttg
cgtgaaaagcagcatattcgcgagcattatcaggcccgtttcaaacacatcttggtcgat
gagtttcaagataccaacaacatccaatacgcatggctccgtatgatggcagggccagac
tctcacgtgatgattgtcggcgatgatgatcagtctatctatggttggcgtggggccaaa
atcgaaaacattgagaaattcacccgtgagtttccaagtgtcaataccatccgccttgaa
caaaactaccgttcgaccaaaaccattcttgaagcgtccaataccttgattgccaacaat
accgagcgtatgggtaaagagttgtggacagacggtgcagaaggtgagcctatctctgtt
tattcggcttataacgaattggatgaagcgcgctttgcggtcaacaaggtcaaagagtgg
caagacaaggggggagcgctgaacgacgcggcgatgctataccgtaacaacgctcaatcg
agggtattggaagaagcgttgattcaagccgggctgccgtaccgaatttatggcggcatg
cgcttcttcgaacgccaagagatcaaagatgcgctcagctacctaagattaatgtccaac
cgcaacgatgatgcggcctttgagcgcgtggtaaatacacccacccggggtttgggcgat
aaaaccttagaaacgattcgttttgccgctcgtgaccgaggatgcaccttgtggcaagcg
agtactgcgctgctcgaggagcaagtgctgccaggccgagctgctggcgcattaagccgc
tttgtcgaacttattcaagctcttgaagacgatacgtttgaaatgtccttgcatgagcag
actgaccacgtgattaagtattcaggtctgtttgccatgtatgaacaagagaagggtgag
aagtcgaaagcgcgaatagaaaacttggaagagctggtgacggcaacccgccagttcgag
aaaccagaagaagcggaagagatgacgctgctgaccgcgttcttgacgcacgccgcctta
gaagcgggtgagggccaggcggatgagtttgaagatgcggtgcaactgatgaccctgcac
agtgccaaaggacttgagttcccgttggtatttatggtcggcgtcgaggagggcatgttc
cctagccagatgtccgccgaggaggcgggccgcttggaagaggaacgtcgcctctgctat
gtgggtatgacgagggcgatggaaaaactctacattacctatgcggaaatgcgccggcta
tatggccaagataagtatcacaagccttcccgttttattcgtgaactgccagaaacgtgc
ttggatgaagtgcggatgaaagcgcaggtcagccgtccggctagctcggggcgctttagc
caaacggtagtcaaagagagttttaacgaaactggctttagtttaggtgcgcgcgtgatg
catccaaaatttggtgagggcaccatcattaattttgaaggcagcggcccacaaagccga
gtacaagtggcgtttaacggcgaaggcattaagtggctggtaacggcgtacgccaaacta
gaaaagctgtaa
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