Vibrio sinaloensis: MTO69_16305
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Entry
MTO69_16305 CDS
T08230
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vsi
Vibrio sinaloensis
Pathway
vsi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MTO69_16305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsi03000
]
MTO69_16305
03400 DNA repair and recombination proteins [BR:
vsi03400
]
MTO69_16305
Enzymes [BR:
vsi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MTO69_16305
Transcription factors [BR:
vsi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MTO69_16305
DNA repair and recombination proteins [BR:
vsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MTO69_16305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
UPQ89328
LinkDB
All DBs
Position
2:complement(608972..610336)
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AA seq
454 aa
AA seq
DB search
MSRVITKLTQNECHTARVARDSRFDGQFYVAVKTTGIFCRPICPANLPKEENVEYFHDKA
QALQAGYRPCLRCRPDSAPSSWAWKGTEVTFQRAIRFIEQGELQRCSLAELCLRLGISDR
YLRKLFNHYLGMSPKQYALYYQLMFAKQLLHSSQLSVTDIALASGFNSVRRFNDAFYKVM
KMSPSQLRKVEQKQVHTNCLDLAYRGPLDWQHMLDFYRLRAIDGLEVVTEHAYQRSVSLN
GQRAWFSIAHRKPGVMRVEFQLEQVSQLRALVNQFRRMFDLDSDVLSIEQHLSSLAPDLV
KRSGIRIPGVWSAWEAGVRAILGQQVSIKAAIGQLNLLVATLQPNEVTHFPTPTDLINAD
LSFLRMPQSRKQTLARFASYVAQYPQHDPSEWLKIKGIGPWTVNYAKLRGQSDPNCFLEG
DLVVKKALQTFNQLNPKSVAPWGSYATFHCWSHA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtgtaatcacaaagcttacgcaaaacgagtgtcatactgcgcgggttgcccgt
gacagtcgttttgatggccaattttatgttgcggtcaaaaccaccgggatattttgtcga
ccgatttgtccggctaacttgccgaaagaagagaacgtcgagtacttccacgacaaggcg
caagccctgcaagcgggttaccgaccttgtttgcgttgtcgcccagacagtgcaccgagc
tcctgggcgtggaagggcacagaagtgacctttcaacgagcgattcgctttatcgaacaa
ggggagttgcagcgttgctctctagccgagctttgcctgcgtttaggcatatcggaccgc
tacttgcgaaaactgttcaatcactatttgggcatgtcgcctaagcaatatgcgctctac
tatcagctcatgttcgctaaacagctgctgcacagtagccagttgtcggtaacggatatc
gcgttagccagcggttttaacagcgttcgtcgtttcaatgatgctttttataaggtgatg
aagatgtcgccatcgcagttgagaaaggtcgagcaaaagcaagtacacactaactgcctt
gacttggcttatcgtgggccgctcgattggcagcacatgttggacttctatcgtttacgt
gcgattgatggcttagaagtcgtgaccgagcatgcgtatcagcgcagtgtctcactcaac
ggacagcgagcttggttttccatcgctcaccgcaagcctggggttatgcgggttgagttc
caattggaacaggtcagtcagttgagagctttggttaaccagttcaggcgaatgtttgat
ttagatagtgatgtgttgagtattgagcagcacctatccagtttggctcctgatctggtt
aagcgatctggtattcgtattcccggcgtttggagcgcttgggaggcaggtgttcgagcc
atcctaggtcaacaagtgtcgattaaagcggcgattggtcagctcaatttgttagtggcg
acgttgcagccgaatgaggtgacgcactttcctacgccaaccgatttgatcaacgcggat
ttgtcgtttttgcgtatgccacaaagccgcaaacagacacttgcgcgctttgccagttat
gtggctcagtatccgcaacacgaccctagcgaatggctgaaaatcaaggggattggccct
tggaccgtaaactatgccaagttgcgaggccaaagtgatccaaactgttttttagaaggg
gatttggtggtgaaaaaagcgttgcagacctttaaccaactcaatcctaaatcggttgct
ccgtggggcagctacgccacatttcattgttggagtcatgcatga
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