Vibrio sinaloensis: MTO69_17770
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Entry
MTO69_17770 CDS
T08230
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vsi
Vibrio sinaloensis
Brite
KEGG Orthology (KO) [BR:
vsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsi03016
]
MTO69_17770 (rnb)
Enzymes [BR:
vsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
MTO69_17770 (rnb)
Transfer RNA biogenesis [BR:
vsi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MTO69_17770 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
UPQ89598
LinkDB
All DBs
Position
2:952123..954129
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AA seq
668 aa
AA seq
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MFQDNPLLAQLKQQIQETLPKKEGTIKATEKGFGFLEVDSKTSFFIPPPYMKKCLHGDKV
KAIIRTEKEREVAEPEELIEQGLTRFIGRVKLFKGKLNVAPDHPQLKKLSLKAKTRKGIK
SDDLKEGDWVVAHLTRHPLKGDNGFFVEISEKITDADDKIAPWWVTLAENDLPNSEPAGI
EHWEIKDDADLERIDMTHIPFVTIDGESTKDMDDALYAKKSDNGDFELTIAIADPTAYIT
PDSEMDKVARERGFTIYLPGRNIPMLPRDLADELCSLMQDEVRPALCCTVTIDKDGVIGD
DIRFFAANIKSQARLVYDHVSDWLETGESAHWQPSDEIAQVVRDLYDFSLARANWRETHA
VVFPDRPDYRFELSEDNDVVAIHADLRRSANRLVEEAMITANICAGKTLQATFNSGVFNT
HAGFKPEKIEDVVKLVNPEGELPFTADSIATLDGFAALRRWLAGQDTSYLDNRIRKSQAY
SEIGNQPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKAHILGKAPVQTADDSVGEELAT
HRKHHKIAERNVSDWLYARTLAEEPTKGTKFNGEIFDINRAGMRVRLLENGAAAFIPGTL
ILANKERLECNGDNGTVSIDKEVIYRLGDVLEVVLTDVNQENRSLVAKPTQVFEDVKSAE
EAQAPTEE
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagataacccgctactggctcaacttaagcagcaaattcaagaaacgcttccg
aaaaaggaaggcaccatcaaagcaaccgaaaaaggctttggttttctcgaagtcgatagc
aaaactagcttctttatcccgccaccgtacatgaaaaaatgtctgcatggtgacaaggtc
aaagccattattcgtactgaaaaagagcgtgaagtggcggagccggaagagctgattgag
caaggactaacgcgctttattggtcgcgtgaaactgtttaagggtaagctcaatgtggca
ccggatcaccctcaattgaagaagctttctctaaaagccaaaacccgtaaaggcatcaaa
agcgatgaccttaaagagggcgactgggtcgtggcgcacctgactcgccatccacttaag
ggggacaatggcttctttgttgaaatcagtgaaaaaatcaccgacgctgacgataaaatc
gcgccatggtgggtaacactcgcagagaacgatctgcctaacagcgagcctgcaggcatt
gagcattgggagatcaaagacgatgcggatctagaacgtatcgacatgacgcacattcct
tttgttaccattgatggtgaatcgaccaaagatatggacgatgctctgtacgcgaaaaaa
agtgacaatggcgacttcgagctgaccatcgcaattgccgatccgacagcctacatcaca
ccagacagtgagatggataaagtcgcccgcgagcgcggttttactatctacttacctggg
cgcaatattccaatgctgccgcgtgatcttgccgacgagctgtgttctttaatgcaagac
gaagtgcgcccagccttgtgttgcacagtgaccatagataaagatggggtgattggcgat
gacattcgcttctttgcggccaacatcaagtctcaagcgcgtcttgtgtacgaccacgta
tctgactggctggaaacgggtgagtcggcccactggcagccaagcgatgagattgctcaa
gtggtgcgtgatttgtacgacttctcgcttgcccgtgctaactggcgcgaaacgcacgcc
gttgtcttccctgaccgtccagattaccgttttgaattgagtgaagataacgatgttgtg
gcgattcatgccgatctgcgtcgcagtgccaatcgcttagtggaagaagcgatgatcacc
gccaatatctgtgcgggtaagactctgcaagccacgtttaatagtggggtatttaatact
cacgcaggctttaagccagaaaagattgaagatgtggttaagctcgttaaccctgaaggt
gagttgccatttaccgctgattctatcgcgactcttgatggttttgccgcgctgcgccgc
tggttagcaggtcaagacacttcttaccttgataaccgtatccgcaagtcgcaagcttac
agtgaaattggcaatcaaccactgccacattacgcgatgggcttagacatctacgcgact
tggacctctccaattcgtaaatatggcgatatgatcaaccaccgcatgttaaaagcgcac
atcttaggcaaagcgcctgtgcaaacggccgatgatagcgtgggtgaggagctggcgaca
caccgtaaacatcataagattgctgagcgtaatgtcagtgactggctgtacgcgcgcaca
ctcgccgaagagccgactaagggcaccaagtttaacggcgaaatctttgatattaaccgt
gccggtatgcgcgtgcgcttgctggaaaatggcgcagctgccttcattccagggacactg
attttggcgaacaaagagcgtctagagtgcaatggtgataacggtacggtgagtatcgat
aaagaagtcatctaccgtcttggcgatgtgcttgaagtggtgttgactgacgtaaaccaa
gaaaaccgtagcttggtggccaaaccaacccaagtgttcgaagacgttaaaagcgctgaa
gaggcgcaagctccgaccgaggagtaa
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