Vibrio sinaloensis: MTO69_18605
Help
Entry
MTO69_18605 CDS
T08230
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
vsi
Vibrio sinaloensis
Brite
KEGG Orthology (KO) [BR:
vsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsi03000
]
MTO69_18605
Transcription factors [BR:
vsi03000
]
Prokaryotic type
Helix-turn-helix
Other families
MTO69_18605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_2
AAA_5
PAS_4
HTH_30
AAA
HTH_22
PAS_9
sCache_3_2
MCM
AAA_16
Mg_chelatase
HTH_23
HTH_7
PAS_8
HTH_29
AAA_22
HTH_50
DUF6946
DUF2089
Motif
Other DBs
NCBI-ProteinID:
UPQ89759
LinkDB
All DBs
Position
2:1121629..1123380
Genome browser
AA seq
583 aa
AA seq
DB search
MQLQNRQANDWLTSSWSRSSDAGLREIKRPEDTVLSNSVMKERRYRNKLVIEAVEQAALP
LFNQVLSRTDSRLILTDNEGVILASWGQDRFREKLLEIALESGNCWQERLKGTNAIGTAL
YEQRAVSVIGEQHFIKQHRFISCSASPLFDHRGELVGILDVTSEQAQHDVTTQLLVQNMV
QLVENRLLTHIPEAAIQIDLALSESVLNTGWQGIVIADHDGRVVAHNHVACELTRQTNML
GEKIDTLLERSKRQTALVFKQHSLNHATVSKSYVTAASELHSGEDKVESAWQQANKVLGK
DISLLILGETGVGKGEFVKALHKQSERSRAPLVTVNCGALAKDLIESELFGYAPGAFTGA
NSKGYVGRIRQADGGILFLDEIGEMPLDAQCRLLTVLQEKVVMPVGSARSHQVDLQIIAA
THQDLAKLVVEGRFREDLYYRLNGLVIELPSLRERSDKRALIVQLHSKYKPHHQTLSPAL
LDTLCEYHWPGNLRELDNLFKVTCLIASEQAQLTLSDIPSHLSKQILQHQSLSRAQPAKD
LQSTVNSTLLDTYRAHDGNISKVSRVLGVSRNTIYRKLKALGV
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcaattacaaaacagacaagcgaatgattggctcacctcttcttggagccgcagtagt
gatgcggggctaagagagatcaaacgtcctgaagatactgtgctgtccaattcagtgatg
aaagagcgacgttaccgaaacaagcttgtgattgaagcagtagagcaagccgctctgcct
ctgtttaatcaggtgttgagccgtacagatagccgtttaattctgaccgataacgagggg
gtgattcttgcaagctggggtcaagatcgctttcgcgaaaagctgctcgagattgcattg
gagtcgggaaactgttggcaagagcggctgaaagggaccaacgccatcggtacggctttg
tatgaacaacgagcggtatcagtgattggagagcaacactttatcaaacaacatcgcttt
atcagttgttctgctagcccattgtttgatcatcgcggagagttggttggcatattggat
gtcaccagtgagcaagcccaacacgatgtgaccacacagcttctggtgcagaatatggtg
cagctagtagaaaaccgcttgttgacccatattccagaggcggcaatccaaatcgaccta
gcgttaagtgaatcggtgctcaatacaggttggcaagggattgtcattgccgaccacgat
gggcgagttgtggctcacaatcacgtagcttgtgagctgacacgtcaaaccaatatgctc
ggagaaaaaatcgatacgctactggagcgttcaaagcggcaaacggcgttggtgtttaag
caacattcgctaaatcacgcaacggtgagtaaatcatacgtcactgcggccagtgagctg
catagtggcgaagacaaggtagaaagcgcgtggcagcaagcgaacaaggtattaggcaaa
gacattagtctactgatcctcggcgagaccggggtcggcaaaggagagttcgttaaagcg
ctacacaagcagagcgagagaagccgtgcgcctttggtgacggtaaattgtggcgcgctg
gctaaagatctgatcgaatcagagctgtttggctacgcgcctggcgcctttacgggggcg
aacagcaaagggtatgtagggcgaattcgccaagccgacggcggcatcctgtttttggat
gagattggtgaaatgccactggatgctcagtgccggctgctaaccgtgttgcaagaaaaa
gtggtgatgcctgttggctcggcgcgcagccatcaagtggatctgcaaatcatcgccgcc
acgcaccaagaccttgcaaagttggtggttgaagggcgttttcgagaagatctttactac
cgtctcaacggattggttatcgagttaccttcgctaagagaacgcagtgataaacgtgcc
cttatcgtacaactgcacagcaagtacaagccacatcatcaaaccctgtcacccgctttg
ctcgataccttgtgtgaatatcactggcccggcaacttgcgtgaactggacaatttattc
aaagtcacttgcctgattgccagtgagcaagcgcaactgacgttgagtgatattcccagc
catttgtcgaaacagattttgcaacatcagtcgctgagtcgagcgcaaccggccaaggat
ctacaatcgacggtgaactcaaccttgcttgatacttatcgggcccatgatggcaatatc
agtaaagtatcacgagtgctaggggtgagccgaaataccatctatcgcaagctaaaagcg
ctgggtgtctga
DBGET
integrated database retrieval system
