Vibrio splendidus: LTQ54_01200
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Entry
LTQ54_01200 CDS
T08240
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
vsl
Vibrio splendidus
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsl03400
]
LTQ54_01200
Enzymes [BR:
vsl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
LTQ54_01200
DNA repair and recombination proteins [BR:
vsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
LTQ54_01200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
AKAP7_NLS
DUF2380
Motif
Other DBs
NCBI-ProteinID:
UOE84670
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All DBs
Position
1:232941..234500
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AA seq
519 aa
AA seq
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MNFKTVRFVLGDQLNIQHSWYQQVDDEVIYIIAELKQETDYVASHIQKVAAFFSAMGYFA
DELKQQGHQVLHLTLDDTTQFENLDALLQHYVHEFGAEKFEYQRPDEYRLLEQMNKLKLT
NATKSCCDTEHFLFPFEEIEQQFPKDKHIMMEHFYRRMRKRFDILLEDGKPVGGKWNYDA
SNRKKLKKQDIENLPQPLMFANDISAILERIERHQIQTIGEVGDQLLWPVNRAQSLSLLA
HFCQVCLPLFGQFQDAMTTEHDSKWSLYHSRLSFSMNSKLLSPQEVIDAALSAYQASSKI
NTPTIDIAQVEGFVRQILGWREYIRAVYWANMPAYANKNHYSATNKLPHYFWDGQTKMNC
MKHAIDQSLEFAYAHHIQRLMITGNFCLITAIDPYQVDSWYLGIYVDAIEWVEMPNTRGM
ALFADGGIVGTKPYSASGSYINRMSDYCKGCHYKIKERSGEQSCPFNSLYWRFMNQHRDA
LNRNPRMGMLYRSWDNMDEQDQQAILETAEQRITNLENL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaaaaccgttcgctttgtcttaggcgaccaactcaatatccagcactcttgg
tatcaacaggttgatgacgaggtcatttacatcattgccgaacttaagcaagagactgac
tacgttgcatcgcacatccaaaaggtggcggcttttttctcggcgatgggctattttgcc
gacgaactcaaacaacaaggtcatcaggtactccacttaactcttgatgacacgactcaa
tttgaaaatctcgatgcgctattgcagcactatgtacacgaattcggcgctgagaaattc
gaatatcaaaggccagatgaatatcgccttttagagcagatgaacaagctgaagctcact
aatgcgaccaaaagttgttgtgatacggaacacttcctctttccattcgaagagatagaa
caacagtttccgaaagacaaacacatcatgatggaacacttctatcgccgaatgagaaag
cgcttcgacattttgctagaagacggaaagccagttggcggcaaatggaattacgatgcg
agcaatcgaaagaaactcaagaaacaagacattgagaacctacctcaacctctgatgttt
gccaacgacatttccgcgattttagaacgcatcgagcgtcatcaaattcaaaccattggt
gaagttggcgaccaattattatggccagttaaccgcgcacaaagcttgtctttactcgcg
cacttctgccaagtctgtttaccgctgttcggtcagtttcaagatgcgatgacgacagaa
cacgactcaaaatggagcttgtaccatagccgcctctccttttcgatgaacagcaaactg
ctaagcccccaagaagtgattgatgctgcgctgtcggcttatcaggcctcttctaagata
aacacacccactatcgacattgcacaagtcgaagggtttgtacgccaaatactggggtgg
cgagagtacatacgcgccgtctattgggcaaacatgcctgcgtacgccaataaaaaccat
tattcagcaaccaataagctgcctcattacttttgggatggacaaacaaaaatgaattgc
atgaagcatgcgattgaccagtcccttgaatttgcttacgcgcatcacatccaaaggtta
atgatcactggcaacttctgcttaattacggccatagacccctaccaagtagacagttgg
taccttggtatatacgtcgatgcgattgagtgggtcgaaatgccaaatacgcgaggtatg
gcactgtttgcggatggcgggatcgtcggaaccaaaccatactctgccagcggttcttac
atcaaccgtatgagtgactactgcaaaggttgtcactacaagataaaagaacgcagcgga
gagcaatcatgccctttcaatagcttgtactggcgctttatgaaccagcaccgcgatgcg
ttaaaccgtaacccacgcatgggcatgttatatcgctcttgggacaatatggatgaacaa
gaccaacaagcgatactcgagaccgcagaacaacgaatcacaaacttggagaatttataa
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