Vibrio splendidus: LTQ54_01950
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Entry
LTQ54_01950 CDS
T08240
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
vsl
Vibrio splendidus
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsl03032
]
LTQ54_01950
03036 Chromosome and associated proteins [BR:
vsl03036
]
LTQ54_01950
03400 DNA repair and recombination proteins [BR:
vsl03400
]
LTQ54_01950
DNA replication proteins [BR:
vsl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LTQ54_01950
Chromosome and associated proteins [BR:
vsl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LTQ54_01950
DNA repair and recombination proteins [BR:
vsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LTQ54_01950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
UOE84807
LinkDB
All DBs
Position
1:393848..394123
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSQLVEHIATSADISKDQAGSALNALVEGISNTLAKGDDVAILGFGSFKVNSRAARTG
RNPRTGEEIQISASKTPAFKAGKALKESCNA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatctcagttggttgaacacatcgcaacttcagcagacatctcaaaagatcaa
gcaggttcagcgttaaacgcacttgttgaaggtatctctaacacattggctaagggtgat
gatgttgccatccttggtttcggtagtttcaaagttaattctcgtgctgctcgcactggt
cgtaacccaagaaccggagaagagattcaaatctcagcatcaaaaacgcctgcgtttaaa
gcaggtaaagcactaaaagagtcatgtaacgcttag
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