Vibrio splendidus: LTQ54_04595
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Entry
LTQ54_04595 CDS
T08240
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
vsl
Vibrio splendidus
Pathway
vsl02020
Two-component system
vsl02040
Flagellar assembly
vsl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LTQ54_04595
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
LTQ54_04595
09142 Cell motility
02040 Flagellar assembly
LTQ54_04595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vsl03021
]
LTQ54_04595
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vsl02035
]
LTQ54_04595
Transcription machinery [BR:
vsl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LTQ54_04595
Bacterial motility proteins [BR:
vsl02035
]
Flagellar system
Flagellar assembly proteins
Stator
LTQ54_04595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_10
UPF0122
Rv2175c_wHTH
MarR_2
GerE
HTH_24
HTH_Mga
MarR
Frankia_peptide
Motif
Other DBs
NCBI-ProteinID:
UOE85304
LinkDB
All DBs
Position
1:complement(998868..999602)
Genome browser
AA seq
244 aa
AA seq
DB search
MNKALTYDQHANHNSQQAFFEKYSVLVKRIAHHLLGRLPPNVLVDDLIQAGMIGLIEAQQ
NYDGTKGASFETYAGIRIRGAMLDDIRRGDWVPRSVHKNNREISSAIAELEGTLNRDPSD
AEVAKHMGLSLDQYHNALTDINCSRLVGIEDLGVSDDVISPNEDSQDNTPFQGVADESFR
QALIDSIKQLPEREGLVLSLYYDEELNLKEIGEVLGVSESRVSQILSQSMQRLRTKLSAW
TQND
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcgcttacttacgatcaacatgctaatcacaatagccaacaggcttttttt
gagaagtattctgtgttggttaaacgtatcgctcatcacttgttggggcgattaccgcct
aatgtcttggttgatgacttaattcaagctggcatgattggcttgattgaagcgcaacaa
aactatgatggtaccaaaggcgcaagctttgagacgtatgcaggtattcggattcgcgga
gctatgttggatgacattcgccgtggtgactgggtgccgagatcggttcataaaaacaat
cgagaaatcagcagtgcaatcgcggaattagagggtaccctcaatcgcgacccaagtgat
gccgaagtggcaaagcacatggggctgagtttagaccagtaccacaacgctttaactgat
attaattgctcaagacttgtcggaatcgaagatttaggcgtctcagatgatgtaatatct
ccgaatgaagactctcaagataacacgccttttcaaggggttgctgatgagtcatttcgt
caagctttgatcgattcgataaaacaacttccggaaagggaaggcctcgtgctttcgctt
tattacgacgaagaactcaatttaaaagagattggggaagtactaggtgtcagcgaatct
cgtgtcagccaaatactgagccaatctatgcagcgtttacgcactaagttaagtgcttgg
acacagaacgactaa
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integrated database retrieval system
