Vibrio splendidus: LTQ54_04690
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Entry
LTQ54_04690 CDS
T08240
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
vsl
Vibrio splendidus
Pathway
vsl02020
Two-component system
vsl02040
Flagellar assembly
vsl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LTQ54_04690
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
LTQ54_04690
09142 Cell motility
02040 Flagellar assembly
LTQ54_04690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vsl02022
]
LTQ54_04690
02035 Bacterial motility proteins [BR:
vsl02035
]
LTQ54_04690
Two-component system [BR:
vsl02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
LTQ54_04690
Bacterial motility proteins [BR:
vsl02035
]
Flagellar system
Flagellar assembly proteins
Others
LTQ54_04690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
Mg_chelatase
HTH_20
FleQ
AAA_7
DUF2089
AAA_16
AAA_19
MCM
HTH_24
MerR
HTH_11
HTH_28
AAA_3
AAA
HTH_Crp_2
HTH_5
HTH_10
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
UOE85323
LinkDB
All DBs
Position
1:complement(1018448..1019857)
Genome browser
AA seq
469 aa
AA seq
DB search
MAQSKVLIVEDDEGLREALVDTLALAGYEWLEADCAEDALVKLKSNSVDIVVSDVQMAGM
GGLALLRNIKQHWPNLPVLLMTAYANIEDAVAAMKEGAIDYMAKPFAPEVLLNMVSRYAP
VKSDDNGDAIVADEKSIKLMMLADKVAKTDANVMVLGPSGSGKEVMSRYIHNASSRKDGP
FVAINCAAIPDNMLEATLFGYDKGAFTGAIQACPGKFEQAQGGTILLDEISEMDLSLQAK
LLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVSEGNFREDLYYRLNVFPITWPAL
CERKGDIEPLAKHLVERHCTKLGMPVPVLSEQAISKLVNYPWPGNVRELDNVVQRALILS
EQENISGEHILLEGVDWQDASGLQQIVEGNSVAAPDIKPIAEANPLSKVVASSEGLGNEL
RDQEYAIILETLIACNGRRKDMAEKLGISPRTLRYKLAKMRDAGIDIPN
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaagcaaagtgttaatcgtcgaagatgatgaaggtctacgcgaagcccttgtc
gacactctcgcgcttgctggctatgaatggctggaagcggattgtgcggaagatgctctg
gtaaaattgaaatcgaactccgttgatattgttgtctctgatgtacagatggcaggtatg
ggcggcttagcactgttaagaaatatcaagcagcattggccaaatctaccagtattgttg
atgacagcgtatgccaacattgaagacgccgttgctgcaatgaaagagggcgctatagac
tatatggcaaagccatttgcgcctgaagtgctgcttaatatggtgagccgttacgctccc
gtaaaatcggatgataatggcgatgccatcgttgccgatgagaaaagcatcaaactaatg
atgttggctgataaggtggctaaaaccgatgctaacgtcatggtgttggggccaagtggt
tctggtaaagaggtcatgtctcgctatattcacaacgcttcgagccgtaaagacggtccg
tttgttgcgattaactgtgccgcgattccagataacatgttggaagcaacactgtttggc
tacgataaaggcgcatttactggtgctattcaagcttgtcctggtaaatttgagcaagct
caaggcggtactattttgttggatgagatcagtgaaatggatcttagcctacaagcgaaa
ctactgcgtgtgttgcaagagcgcgaagttgaacgtcttggtagccgtaagagtatcaag
ctggatgttcgtgttctggcaaccagtaaccgcgacctaaagcagtatgtttctgaaggg
aatttccgtgaagatttatactaccgcttgaatgtatttccaattacttggccagcactg
tgtgaacgtaaaggcgatattgagccgcttgcgaagcacttggttgagcgccattgcacc
aaacttggtatgcccgttcctgttctgtccgagcaagccatcagtaagctcgtcaattat
ccgtggccgggtaatgtgcgtgaactggataatgtcgtgcagcgcgctctaattctgagt
gagcaagaaaatatttcaggtgagcacatcttgcttgaaggtgtcgattggcaagacgca
agtggtctacagcaaattgttgaaggcaacagtgttgcagcgccagatatcaagccgatt
gctgaagcgaatcctctcagtaaagttgtggcaagcagtgaagggcttggaaatgagctt
cgagatcaagagtatgcgattattcttgaaacactgattgcttgtaatggtcgacgcaaa
gatatggccgaaaagttagggattagccctcgcacattgcgttataagttggcgaaaatg
cgcgatgctggaatagatatcccaaactga
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