Vibrio splendidus: LTQ54_05415
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Entry
LTQ54_05415 CDS
T08240
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vsl
Vibrio splendidus
Pathway
vsl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LTQ54_05415 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsl03400
]
LTQ54_05415 (recC)
Enzymes [BR:
vsl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LTQ54_05415 (recC)
DNA repair and recombination proteins [BR:
vsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LTQ54_05415 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
UOE85447
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All DBs
Position
1:complement(1157397..1160873)
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AA seq
1158 aa
AA seq
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MFTVYHSNKVDTLKILLVHLIKSDPLANPFEKEQILVQSPGMSQWLKMELAKEFGVAANI
DFPLPATFIWDMFTQVLPDVPKRSAFNKEAMTWKLMSLLPAKLDHPDFLPLQRYLENDED
DSKLYQLAEKIADIFDGYLVYRPEWMAMWEAGEPVAELIDDEEQQEHPWQPILWQALYEK
TLSQGQSKYHRGNLYHDFIEALAKQQGQLQHLPKRLFVFGISSLPPRYMDALKALGEQID
VHLMFTNPCQHYWGDIRDRKYLARVEAQRRKQFALIDGLPQLEGEASPLKDGIEANVEDE
LHTSQAVGNSLLASMGKLGRDNLFLLSQSDSEEHEFFIDVERDNLLHQLQADILQLEEHQ
DDHILDSSHHKQVVELGDRSLTVHACHSPMREVEVLHDQLLAMFDADPTLKPRDIIVMVS
DINAYSPAIQAVFGNAPGERYIPYSISDRTADQESPILTAFMQLVALPNTRCLASELLEL
LEIPAMMARFGIDEFQFEQAKQWVEEAGIRWGVDSSTATEFDLPATEQNTWLFGIQRMLL
GYAMSDSAGLFETEHSPIAAYNEVQGINAELAGKLAHFIDRIAHYRQRLTETQSIDMWRE
TLLQMIDDFFAVELEGEVVLKSIRDALSQLNEQLDDALYEQELSPSIIYQYLNNKLSGAR
ISQRFLAGQVNFCTLMPMRSIPFKTVCLLGMNDGVYPRSMPPEGFDLMNGRTRPGDRSRR
DDDRYLFLEAMLSAQECLYISYVGRSIQDNTERVPSVLVSELIEYCQQNYCLSEDQALPS
DDSGIKLTQAISFEHTMTPFSPAAFTQGDASHVLSYAKEWLPAANRSGERSGEFNRALDD
YLLGATYPLELDLVELQRFWRLPVQYFFNRRLKVVFEPPLPVMEDDEPFVLNGLESFQLK
DALLQVLLDHPEGADEAVRLFVSEQKAQGRLPVGAFGDIEFETNRVQAEDLAKEIRFVSG
SPQQDLEVNIEFDVLGEGKPVRLMGWLTQNYQSGLVRFRSGKIRSQDYLAAWIDHLCCAV
MGHGKTTHIIGYDRKEGVVHQTLQPIGDAQQAKSLLAELVRLFYQGMTAPLPYFPKTALS
GVEAGFSRGKWVDDEEKSLKKMADTFNDSFAFTGEGRDTYISRIWSKWDDELAAESRMYS
TLVLQASRLAAADLEDQE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
ttgtttactgtttaccattccaataaagtagatactttaaaaatccttctcgttcactta
attaaaagtgaccctttagccaatcctttcgaaaaagagcagatcttggttcagagccca
ggtatgtctcaatggcttaagatggaactcgccaaagagtttggcgtagcagcaaatatc
gatttcccacttccagcaaccttcatttgggatatgtttacccaagtacttccagatgtt
cctaagcgcagtgcttttaacaaagaagcgatgacatggaagctgatgagtttgctaccc
gctaagcttgaccaccctgattttttacctctacaacgctaccttgaaaacgacgaagat
gattcgaagttgtatcaattggcagaaaaaattgccgatatcttcgatggttacttggtg
tatcgacctgaatggatggcgatgtgggaagcgggagagcccgttgcagaacttatcgat
gatgaggaacaacaagagcacccttggcaaccgattttgtggcaagcactctatgagaaa
accttgtctcaaggccaatctaaatatcaccgtggcaacttgtatcacgacttcattgaa
gcgctagccaagcaacaaggtcaactgcaacatctgcctaaacgcttatttgtgtttggt
atttcttcgttgcctcctcgctacatggatgcattgaaagcgcttggcgagcagattgat
gtgcacttgatgtttaccaatccttgccaacattactggggcgatattcgcgatcgtaaa
tacttggcaagagtcgaagcacagcgccgcaagcagtttgctttgattgatggtttacct
cagcttgaaggcgaagcctcaccattgaaagatggcattgaagccaacgttgaagacgaa
ctacacaccagccaagccgtgggtaatagtttacttgcgtctatgggtaaattgggtaga
gataacctgttcttgctatctcaatcagacagcgaagaacatgagttctttattgatgtt
gagagggataacctgcttcatcaactgcaagccgatattctccagctagaagaacatcaa
gacgaccacatcttagattccagccaccataaacaggtggttgaactgggtgatcgctcg
ctaaccgtgcacgcttgtcacagcccaatgcgtgaggttgaagtccttcatgatcagctg
ttggcaatgtttgatgctgacccgacactgaagccacgcgatatcatcgtgatggtgtct
gacattaatgcttatagcccagcgattcaggcggtatttggtaatgctccgggtgagcgt
tatatcccttactcgatctctgatagaaccgcagaccaagaaagcccaattctgaccgcc
ttcatgcagttggtcgcgttaccgaatacgcgttgtttagcgtctgagttgctagagctg
ttagaaatccctgcaatgatggcgcgctttggtattgatgagtttcaattcgagcaagcc
aagcaatgggttgaagaagcgggcatccgttggggtgtcgactcttctaccgcaacggaa
tttgatctacctgcaaccgagcaaaatacctggctatttggtattcagcgcatgttattg
ggttatgcgatgtcggactctgcgggtttatttgaaactgaacactctccgattgccgct
tataacgaagttcaaggcattaacgccgaacttgcaggcaagttagctcactttatcgat
cgtattgcccattaccgtcaacgtttaactgaaacacaatctatcgatatgtggcgtgaa
accttgctgcaaatgattgatgatttctttgcggttgaactagaaggtgaggtggtgctt
aagtcgattcgtgatgcgctttctcaattaaatgaacagcttgatgatgccttgtatgag
caagagttgtcgccaagcatcatttatcagtatctaaataataaactgtcgggcgcccgt
attagtcagcgtttcttagcgggacaagttaacttttgtaccttgatgccgatgcgttct
attccgttcaaaaccgtctgtttgttaggcatgaatgatggtgtttaccctcgctcaatg
ccgccagaaggttttgacttaatgaacggacgcacacgacctggcgatcgctctcgtcgt
gatgatgaccgttatctattcctagaagcaatgctgtcagcacaagagtgtttatacatc
agctatgtcggccgttctattcaagataataccgagcgagtgccatcggtattggtttca
gagttgatcgagtactgccaacagaactactgcctaagtgaggatcaagcactaccaagt
gatgattcaggcatcaagctgactcaagcgatcagctttgaacacaccatgacaccgttc
agccctgctgcgtttactcaaggtgatgcgagccatgtattgagttatgccaaagagtgg
ctacctgcggctaaccgttccggtgaacgcagtggtgagttcaatcgcgcattggacgac
tatttgttgggtgcaacgtatccgttggaattggatctggttgaattacagcgtttctgg
cgcttaccggttcagtacttctttaatcgccgcctaaaagtggtatttgagccgccactt
cctgtgatggaagacgatgagccatttgtacttaatggtttagagagtttccaacttaag
gatgctttgctgcaagtgctgctagaccaccctgaaggtgcagacgaagcggttcgattg
tttgtctctgagcaaaaagcacagggccgattaccggtcggcgcctttggtgacatcgaa
tttgaaaccaaccgtgttcaagcggaagacttagccaaagagattcgatttgtgagcgga
tcaccgcagcaagatctcgaagtgaatatcgaatttgatgtgttaggcgaaggtaagcct
gttcgtttgatgggttggttaactcaaaactatcaatcgggtctagttcgtttccgtagc
ggtaaaatacgctctcaagattatttggcagcgtggattgatcatctatgttgtgcagtg
atgggacacggaaaaacgacccatattattggctacgacagaaaagaaggcgtggttcac
caaacgctacaaccgattggcgatgcgcagcaggcgaagagcttgttggcagagttagta
cgactgttttatcaaggcatgacagcaccgctaccttacttcccgaaaaccgcattgtct
ggcgttgaggctggctttagtcgtgggaaatgggtcgatgacgaagaaaagtcccttaag
aaaatggccgatacctttaatgacagcttcgccttcacgggcgagggtagagatacctac
atctcacgtatttggtctaaatgggacgatgagttggctgctgagtcacggatgtattca
acgcttgtgctgcaggcgtcaaggttggctgctgccgatctggaagatcaggagtaa
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