Vibrio splendidus: LTQ54_06000
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Entry
LTQ54_06000 CDS
T08240
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
vsl
Vibrio splendidus
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vsl03110
]
LTQ54_06000 (clpB)
Chaperones and folding catalysts [BR:
vsl03110
]
Heat shock proteins
HSP100
LTQ54_06000 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_14
nSTAND3
ATPase_2
TniB
RuvB_N
AAA_18
AAA_24
IstB_IS21
bpMoxR
AAA_7
NBD_SMAX1
AAA_19
RHH_3
Torsin
Motif
Other DBs
NCBI-ProteinID:
UOE85554
LinkDB
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Position
1:complement(1292575..1295148)
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AA seq
857 aa
AA seq
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MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVSLLNQDGSAIRPLLTMLNIDVVQL
RSKLSEILDRVPKVSGIGGDVQLSNAMGTLFNLCDKVAQKRQDSYISSEVFLLAAIEDKG
PLGNLLKELGLTEQKLSQAIEQVRGGQKVDDPNAEDRRQALEKFTIDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL
DMGSLIAGAKYRGEFEERLKSVLNELSKEEGNIILFIDEIHTMVGAGKGEGSMDAGNMLK
PALARGELHCVGATTLDEHRQYIEKDPALERRFQKVIVDEPTVEDTVAILRGLKERYELH
HHVEITDPAIVAAATLSHRYVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKII
QLKIEQQALTNENDEASEKRLRTLQSELSEKERDFAELEEVWNAEKAALSGTQHIKSELE
QARMDMDFARRAGDLNRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDAEIADVL
SKQTGIPVSKMLEAEKEKLLKMEGVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGS
FLFLGPTGVGKTELCKTLANFMFDSDDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSSRIQENFNTLDYQGIKNEVMEVVGKHFRPEFLNRVDESVVFHPLGQAHIESIAAIQLE
HLKKRMEDNGYELEVSDKALKLISQVGFDPVYGARPLKRAIQQSVENPLAKAILAGKINP
DKKVQLLVNNDRIIAHQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcgatcggttcactagtaaattccaaattgcgatatctgatgctcagtcgctc
gcattaggtcgtgatcaccaatatatagaacctgtgcacctaatggtgtctttgcttaat
caagatggcagtgcgattcgtccattgcttactatgctgaacattgatgttgttcaattg
cgttctaaattgagcgaaatattagaccgagtgccaaaagtaagtggtatcggtggtgat
gttcagctttcgaatgccatgggaacgttgttcaacctatgtgacaaggtcgcgcaaaag
cgccaagacagttacatatcttcagaagtattcctactcgctgcaattgaagacaaaggt
cctttagggaacttacttaaagagttaggccttactgagcaaaaactatctcaagctatc
gagcaagttcgtggtggtcaaaaagtcgatgacccgaatgcggaagatagacgccaagca
ttagagaagttcaccattgatctgaccgaaagagcagagcaaggcaagctagatcctgtg
attggtcgagacgatgaaatccgtcgtactatccaagtacttcaacgccgtactaagaat
aaccctgtcattattggtgagcctggtgtcggaaaaacggcaatcgttgaaggtttggcg
cagcgcattatcaataatgaagtaccggaaggcttgagagggcgacgagttctttcatta
gacatgggctctttgattgcaggtgctaaatatcgtggtgaatttgaagagcgcttgaaa
tcggttctcaacgaattatcgaaagaagagggcaacattattctcttcatcgatgaaatt
cacaccatggtaggagcaggtaaaggcgaaggctctatggacgccggtaatatgctgaaa
ccagcattggctcgtggtgagctgcattgtgtaggcgcaacgacactcgatgaacatcgt
cagtatatagagaaagatcctgcattagagcgtcgattccaaaaagtgatagtcgatgag
ccaaccgttgaagacacagttgcgattcttcgtggtttgaaagagcgctatgaacttcac
catcatgtagaaattactgacccagcgattgtagcggcggcaacgttatctcatcgatac
gtttcagatcgtcagttaccagataaggcgattgatctcattgatgaagcggcttcgagc
attcgcatgcagatcgattcaaaacctgagtcgctagataagctcgagcgcaaaatcatt
caattgaagatcgagcagcaagctctcacgaatgaaaatgatgaagccagtgaaaagagg
cttcgcacgctgcaaagtgaactttctgagaaggagcgggattttgctgagcttgaagaa
gtttggaacgctgaaaaagcggcgctttccgggacgcaacatatcaaatcagagttagaa
caagctcgtatggatatggactttgcacgacgtgctggcgatcttaaccgaatgtctgaa
ttgcaatatggtcgaatcccagagttggagaagcagttagacctcgcgactcaagctgaa
atgcaagaaatgaccttattacgtaataaggtaactgacgctgaaattgccgatgttctt
tcaaagcaaaccggcattccggtttctaaaatgctagaggcagaaaaagagaagcttctg
aaaatggaaggtgttctgcataagcgggttattgggcaagccgaagcggtagaagtggta
tcgaatgcgattcgtcgtagtcgtgctggtttatccgatccaaataagccgattggttct
ttcttatttcttggtccaacgggcgtaggtaaaaccgagctgtgtaaaacattggctaac
ttcatgtttgatagtgacgatgccatggttcgtatcgatatgtctgagtttatggagaaa
cactcagtggctcgtttggttggtgctcctccaggttacgttgggtatgaagaaggtggt
tacttaactgaagctgttcgtcgaaaaccttattctgtgattctgcttgatgaggtagag
aaagcgcaccctgatgttttcaatattctattgcaggttttagatgatggacgattaact
gacggacaaggtcgcacggtcgatttcagaaataccgtagtgatcatgacatctaatctt
ggctcttcgagaattcaagaaaacttcaatacgctcgattaccaaggaataaagaatgag
gtgatggaagtggtaggtaagcatttccgccctgagtttttgaaccgtgttgatgaaagt
gtcgtgttccatccattaggccaagctcacatcgagtcaatagccgctattcagcttgag
catttgaagaaacgaatggaagacaatggctatgagcttgaagtttcggacaaagcactg
aagttgatctctcaagtcggttttgatcctgtctatggtgcgaggcctcttaaaagagca
attcagcagagtgttgagaacccattagcgaaagcgatacttgcagggaaaatcaatccg
gataagaaagtgcagctattagtgaataacgaccgaattattgctcaccaataa
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