Vibrio splendidus: LTQ54_07910
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Entry
LTQ54_07910 CDS
T08240
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vsl
Vibrio splendidus
Pathway
vsl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LTQ54_07910 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsl03400
]
LTQ54_07910 (mutM)
Enzymes [BR:
vsl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LTQ54_07910 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LTQ54_07910 (mutM)
DNA repair and recombination proteins [BR:
vsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LTQ54_07910 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
UOE85886
LinkDB
All DBs
Position
1:complement(1736240..1737049)
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AA seq
269 aa
AA seq
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MPELPEVEVSRMGISPHLVGEKIKSLTFRTPKLRWDIPQELKKLEGQLIRSISRRAKYLL
IETDMGTAIVHLGMSGSLRVLDADFPAAKHDHVDLKLTNGKVLRYNDPRRFGAWLWSAPD
EIHTVLLGSGPEPLTDDFNADYIAEKAEKRKVAVKQFIMDNKVVVGVGNIYANEALFSSR
IHPLRPANKITQAEWILLTKEIKQVLATAIKQGGTTLKDFAQADGKPGYFAQELQVYGKA
GEKCPNCEALIQELKIGQRNTFFCEECQS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacccgaagttgaagtaagccgtatggggatctcgcctcatttagtcggt
gagaagattaaatccctgacttttcgcacgcctaagctgcgctgggatatccctcaagaa
cttaagaaattagaagggcagttgattcgatcaatctcgcgtcgcgcaaagtacctattg
attgaaaccgatatgggcacagctatagttcacctcggtatgtctggttcattgcgcgtg
ttagatgccgattttcctgcggcaaagcacgatcacgtggatcttaagctcaccaatggc
aaggtactgcgttataacgatccgcgccgctttggtgcgtggctctggtcggcgcctgat
gagatacatactgtattactgggatctggccctgagccactaaccgatgacttcaacgct
gattacattgctgagaaagcagaaaagcgtaaagtggccgtcaaacagttcattatggac
aacaaagtagtggtcggtgtgggaaacatctacgccaatgaagcgctgttttcttcacga
attcatccacttcgccctgctaataagataactcaagccgagtggattttactgaccaaa
gagataaaacaagtactcgctaccgccatcaaacaaggcggtactaccctaaaagatttc
gcacaagcggatggtaagccggggtatttcgctcaagaactgcaagtttatgggaaagcc
ggtgaaaagtgccctaactgtgaagctctaatccaagagttaaaaatagggcagaggaat
acgttcttttgtgaagagtgccaaagttaa
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