KEGG   Vibrio splendidus: LTQ54_08125
Entry
LTQ54_08125       CDS       T08240                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
vsl  Vibrio splendidus
Pathway
vsl03070  Bacterial secretion system
vsl05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vsl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LTQ54_08125 (gspD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    LTQ54_08125 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vsl02044]
    LTQ54_08125 (gspD)
Secretion system [BR:vsl02044]
 Type II secretion system
  General secretion pathway protein
   LTQ54_08125 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: UOE85928
LinkDB
Position
1:complement(1780795..1782816)
AA seq 673 aa
MKHWFKKSAWLLAGSLICTPAAIASDFSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGK
IDVRSYDVLNEEQYYSFFLNVLEVYGYAVVEMDSGVLKIIKAKDSKTSAIPVVGDSDTIK
GDNVVTRVVTVRNVSVRELSPLLRQLNDNAGAGNVVHYDPANIILITGRAAVVNRLAEII
KRVDQAGDKEIEVVELKNASAAEMVRIVDALSKTTDAKNTPAFLQPKLVADERTNAILIS
GDPKVRSRLRRLIEQLDVEMATKGNNQVIYLKYAKAEDLVDVLKGVSDNLQSEKQSSTKG
SSSQRNQVMISAHSDTNSLVITAQPDIMNALQDVIAQLDIRRAQVLIEALIVEMAEGDGV
NLGVQWGNLETGAMIQYSNTGASIGGVMVGLEEAKDQTSTEYYTDNNGNRVPYSVTESGD
YSSLASALSGVNGAAMSVVMGDWTALISAVATDSNSNILSSPSITVMDNGEASFIVGEEV
PVLTGSTAGSSNDNPFQTVERKEVGIKLKVVPQINEGDSVQLQIEQEVSNVLGANGAVDV
RFAKRQLNTSVIVQDGQMLVLGGLIDERALESESKVPFLGDIPVLGHLFKSTSTQVEKKN
LMVFIKPTIIRDGMTADGITQRKYNFIRAEQLYKAEQGLKLMADDNIPVLPKFGADMNHP
AEIQAFIDQMEQE
NT seq 2022 nt   +upstreamnt  +downstreamnt
gtgaagcattggtttaagaaaagtgcatggttattggcaggaagcttaatctgcacaccc
gcagccatcgcgagtgattttagtgccagctttaaaggcactgatattcaagagtttatt
aatattgttggtcgtaacctagagaagacgatcatcgttgacccttcggtgcgcggaaaa
atcgatgtacgcagctacgacgtactcaatgaagagcaatattacagcttcttcctaaac
gtattggaagtgtatggctacgcggttgtcgaaatggactcaggtgttcttaagatcatc
aaggccaaagattcgaaaacatcggcaattccagtcgttggagacagtgatacgatcaaa
ggcgacaacgtggtgacacgtgttgtgacggttcgtaatgtctcggtgcgtgaactttct
cctctgcttcgtcaactaaacgacaatgcaggtgcgggtaacgttgtgcactacgaccct
gcgaatatcattctaattactggccgtgcagccgttgttaatcgtttagccgagatcatc
aagcgcgttgaccaagcgggtgataaagagattgaagtcgttgagctaaagaatgcttct
gcggcagaaatggtacgtatcgttgatgcgttaagcaaaaccactgatgcgaaaaacaca
cctgccttcctacaacctaaattagttgccgatgaacgtaccaatgcgattcttatctca
ggcgaccctaaagtacgtagccgtttaagaaggctgattgaacagcttgatgttgaaatg
gcaaccaagggcaataaccaagttatttaccttaagtacgcaaaagcagaagatttagtt
gatgtgctgaaaggcgtgtcggacaacctgcaatcagaaaagcaatcttcaaccaaaggc
agctcatcgcaacgtaaccaagtgatgatctccgctcacagtgacaccaactctttagtg
attaccgcacagccggacatcatgaatgcgcttcaagatgtgatcgcacagctggatatt
cgtcgtgctcaagtattgattgaagcactgattgtcgaaatggccgaaggtgacggcgtt
aaccttggtgtgcaatggggtaaccttgaaacgggtgccatgattcagtacagcaacact
ggtgcatcgattggcggtgtgatggttggtttggaagaagcaaaagatcaaacgagtaca
gaatactacactgacaataatggtaatcgagtcccttatagcgtgaccgaatccggtgac
tactcatctttagcctccgcactttctggtgttaatggagcggcaatgagcgtggtaatg
ggtgactggactgccttgatcagtgcagtagcgaccgattcaaattcaaatatcctatct
tctccaagtatcaccgtgatggataacggcgaagcgtcgttcattgtgggcgaagaggtg
cctgttttaactggctcgaccgcaggctcaagtaacgataacccattccaaacggttgaa
cgtaaagaagtgggtatcaagcttaaagtggtgccacaaatcaacgaaggtgactcagtt
caactgcaaatagaacaagaagtatcgaacgtattaggcgccaatggtgcggttgatgtg
cgttttgctaagcgacagctaaatacatcagtgattgttcaagacggtcaaatgctggtg
cttggtggcttgattgatgaacgcgcattggaaagtgaatcgaaggtgccgttcttgggt
gatatcccagtgcttggacacctgttcaaatcaaccagtactcaggttgagaaaaagaac
ttaatggtcttcatcaaaccaaccattattcgtgatggtatgacagccgatggtatcact
cagcgtaaatacaacttcatccgtgctgagcagttgtacaaggctgagcaaggactgaaa
ttaatggccgacgataacatcccggtattgcctaaatttggtgccgacatgaatcacccg
gctgaaattcaagccttcatcgatcaaatggaacaagaataa

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